Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq24651 145 2e-29
seq16804 140 1e-27
seq20407 109 2e-18
>seq24651
Length=33304
Score = 145 bits (160), Expect = 2e-29
Identities = 188/260 (72%), Gaps = 0/260 (0%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||| || |||||||||||||| ||||| ||| | ||||| ||||| |||
Sbjct 21994 TCCATAGCCTTTATCAAACGACGCTGAATGTAACCTGTTTCTGCAGTTTTGACAGCAGTA 21935
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
|| || ||||| |||| |||||||| ||||||||| | | |||| ||| || ||
Sbjct 21934 TCGATCAGACCTTCACGGCCACCCATGGCATGGAAGTAGAACTCTGAAGGTGTCAGACCG 21875
Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754
| | | ||||| ||||||| || ||||||| |||||| || ||| ||| | |||
Sbjct 21874 GCCAGATAGGAGTTCTCAACAAACCCACGCGACTCGGGACCATAATCGTCTTTGATGAAG 21815
Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814
|| |||| || | || | | || || || ||||| || || ||||||||||||||
Sbjct 21814 TGCGGCAATGTACGCTTGCGAAAACCATAGGGAATACGTTTGCCCTCAACGTTCTGCTGC 21755
Query 302815 CCCAGGCACGAAATCATCTG 302834
|||| || | ||| | |||
Sbjct 21754 CCCACACAAGCAATAACCTG 21735
>seq16804
Length=18983
Score = 140 bits (154), Expect = 1e-27
Identities = 215/305 (70%), Gaps = 4/305 (1%)
Strand=Plus/Minus
Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633
||||||| ||| |||| || ||||| ||||| || || | ||||| || || ||
Sbjct 9028 TTCCATAGCCTTAATTAGGCGTCGCTGTATATAGCCCGTCTCGGCGGTTTTAACTGCGGT 8969
Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCC 302693
|||||| ||||| | || |||||||| ||||||||| | | |||| ||||| || ||
Sbjct 8968 ATCAATCAGACCCTCTCGTCCACCCATCGCATGGAAGTAGAACTCTGCCGGTGTCAGACC 8909
Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGC--GAATCGTCGAACTTGGTA 302751
|| | | ||| ||||||| |||||||| | ||| ||| ||| ||| ||||
Sbjct 8908 AGTAAGATAAGAGTTCTCAACAAAACCACGGGACTCCGGCTCGAA--GTCCCCCTTGTGG 8851
Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811
|| ||||| || || | || |||| | || || || ||||| || |||||||||
Sbjct 8850 AAATGTGGTAGAGTGCGCCGCTTGAAGCCCCACGGTATTCGTTTTCCCTCCACGTTCTGC 8791
Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAGCATTT 302871
|| || | |||| |||| ||| || | |||| | |||||||||||||| ||| |
Sbjct 8790 TGGCCGACACACGCTATCACCTGAGATACGTTTATGTTGCTGCCCTTGGAGCCGGCAATC 8731
Query 302872 ACCAT 302876
|||||
Sbjct 8730 ACCAT 8726
>seq20407
Length=18981
Score = 109 bits (120), Expect = 2e-18
Identities = 149/205 (73%), Gaps = 6/205 (3%)
Strand=Plus/Plus
Query 251843 CGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCAT 251902
|||| ||||||||| |||||| || |||||||| ||||||||||||||| ||| || |
Sbjct 7335 CGATTGTCATACGAGAGGGAATGGCGTGGGGATTAATGATGATGTCGGGTGCCAGACCCT 7394
Query 251903 CAGCAGTGAAGGGCATATCCTTTTCCT--CAATAATG-TTTCCAATAGTTCCCTTTTGTC 251959
| |||||||||||| ||| |||| | ||| || | || || || || || |
Sbjct 7395 CGCAAGTGAAGGGCATGTCC---TCCTGGCGATACTGAATACCGCACGTGCCTTTCTGGC 7451
Query 251960 CGTGACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCT 252019
||||||| || |||||| || ||||| || ||| || ||| | ||||| ||
Sbjct 7452 CGTGACGTGAGGCGAACTTGTCGCCAATTTGTGGTATGCGTACCGAACGCACGCGAATCT 7511
Query 252020 TACAGAAGTTGTAACCATCACCGTT 252044
||||||| ||||| || |||| |||
Sbjct 7512 TACAGAATTTGTAGCCCTCACTGTT 7536
Score = 104 bits (114), Expect = 7e-17
Identities = 123/167 (74%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| ||||| ||||||||||||||| || |||||||| |||||||| || |||
Sbjct 6764 GCACCGTGAGAAATTTGACAATCACGCTCCATCTCGCCGAAACGTAGACCACCGTCTCGA 6823
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
|| || ||||| ||||||||| ||| | || ||||||| | ||| ||
Sbjct 6824 GCTCTGCCCTCCATAGGCTGACGCACTAGAATTTGCACAGGACCGCGAGCACGGGAGTGA 6883
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACC 251651
||||| | ||||| |||||||||||||| ||| | | ||| ||
Sbjct 6884 ATTTTATCGTCCACCATGTGCTTGAGACGCTGATAGTAAGTGGGGCC 6930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471172667925400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |