Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq20705 264 1e-65 seq30232 131 2e-25 >seq20705 Length=54059 Score = 264 bits (292), Expect = 1e-65 Identities = 724/1103 (66%), Gaps = 22/1103 (2%) Strand=Plus/Plus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| || |||||||||| || || | || || ||||| |||| || ||||||||||| Sbjct 37337 TTTGTCAACAGTAAACTGAATAGCGTTTGCAGCAGGTTTTGTTCGCAAGTAATACATTCC 37396 Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 ||||| | |||| | ||| | ||| | ||||||||||| ||| | || | || Sbjct 37397 TGTTTTAAGCCCAGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCATAGTTGGG 37456 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 | |||| || ||||| || ||||| ||||| || ||||| || | |||| || Sbjct 37457 CTCTGCCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTATCAGCAGC 37516 Query 138333 CATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATG 138392 ||| || ||| |||| || ||||| ||||||||||| | || || | || Sbjct 37517 CATTTTTATTGTTGATTTAACGGAGATTTCCCATACGGTCTTGTACAAGTCTCGGACGTG 37576 Query 138393 TCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCAT 138452 | | || || | |||| |||||||| || | | || || | || |||| Sbjct 37577 TTGAGGAATAGAATCAATGTTTTGAATAGAACCACGGCTTGATATTATTTGGTTCTTCAT 37636 Query 138453 GTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTG 138512 ||| || | | || | ||| | |||| || || || | |||| || || Sbjct 37637 GTCGTCATCCCATAGGTCCAATTCTGTCAAATCTCGTAGTAGGTGATGATTTACTACTTG 37696 Query 138513 AAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTC 138572 |||||||| | || || || | |||||| || ||| | ||||| || ||||| Sbjct 37697 GAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTCGAAGGATTC 37756 Query 138573 GTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATT 138632 || || |||| || || || |||| || || ||||| || | | | |||||| Sbjct 37757 ATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAGCAAAGAATT 37816 Query 138633 CCGTAAACCGTGAAGCTTGATT--CGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA 138690 || | ||||| ||| ||| |||| || || | ||||||||| ||||| | Sbjct 37817 GCGAACGCCGTGTTTCTTAATTGACGTT--TTAAGTGTATTCCAGTCCCATAAATCTGTT 37874 Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750 || |||| |||||||| || |||||||| || || ||| | || |||||||| || Sbjct 37875 GGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCACTGGGCTGCCTTCATAT 37934 Query 138751 GAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAA 138810 | ||||| ||| ||||| || | |||| || ||||||||||| ||| | || Sbjct 37935 GTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGCTCCAAAATAT 37994 Query 138811 ATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGG 138870 || || ||| ||||||||| || || | ||||| |||| ||||| || || | Sbjct 37995 ATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCGTAAGG-ATAC-- 38051 Query 138871 AGCATCGTGAAC---GCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGC 138927 |||| || | || ||||| | || || || || | ||| | ||| || || | Sbjct 38052 CGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGACGGTGCCTT 38111 Query 138928 AGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAA 138987 | || || ||| || || | ||||||| |||| | ||| || |||||||| || Sbjct 38112 AAGTTCGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTATTTTGTTCAAG 38171 Query 138988 TTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTG 139047 ||| || | ||| || || || ||| || ||| |||||| | || Sbjct 38172 TTTTTTGTAACAATCTTTGTTACATCTTTCAATTTTTTAAAGTCGTATTT------TTTT 38225 Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107 ||| | || |||||| | |||| || || |||| |||||| || || | | Sbjct 38226 TCG-----GGAGT-GACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAATT 38279 Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167 || || ||| || || || |||||||||| ||| ||||| || || || || || || Sbjct 38280 TCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTCCA 38339 Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227 | ||||||||||| ||||| || ||||| | ||||||| | |||||||| || || ||| Sbjct 38340 ACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTACCA 38399 Query 139228 GTTTCCACTTGTGTCTCTATAAT 139250 ||||| ||||| | ||| || || Sbjct 38400 GTTTCTACTTGAGACTCAATTAT 38422 Score = 136 bits (150), Expect = 4e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || |||| || ||||| || || || || || || || || ||| | | Sbjct 7086 ATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTCG 7027 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| | |||| || ||| ||||| || |||||||| ||||| ||||| |||||| Sbjct 7026 GATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCAA 6967 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| |||||||||| || ||||| |||| ||| | | |||| || || ||| Sbjct 6966 CAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAAC 6907 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 |||||||| || || ||| | ||||||||| Sbjct 6906 ATTCAAAAAGAGTCTACATTGCACTTGGTG 6877 >seq30232 Length=15380 Score = 131 bits (144), Expect = 2e-25 Identities = 170/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || |||||||| || || | Sbjct 15102 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15043 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||||||||| ||||| || || || ||||| Sbjct 15042 GATACCATTGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGATCAG 14983 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 || ||||||||||| || || || ||||||||||| || || || |||| || || Sbjct 14982 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGA--CG-GACGCACTTTGTCCGACTAC 14926 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932 ||||| || ||||| || ||| | ||||||||| | || |||||||| |||| Sbjct 14925 AACATCCAGAAGGAGTCCACATTGCACTTGGTGCTCCGTTTGCGCGGTGGCG 14874 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || || |||||||| || || | Sbjct 15330 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15271 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| |||||||| ||||| || || || ||||| Sbjct 15270 GATACCATTGAGAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 15211 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 || ||||||||||| || || || ||||||||||| || || || |||| || || Sbjct 15210 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGA--CG-GACGCACTCTGTCCGACTAC 15154 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| || ||||| || || | || |||||| Sbjct 15153 AACATCCAGAAGGAGTCCACTTTGCATTTGGTG 15121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449705268776000