Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 264 1e-65
seq30232 131 2e-25
>seq20705
Length=54059
Score = 264 bits (292), Expect = 1e-65
Identities = 724/1103 (66%), Gaps = 22/1103 (2%)
Strand=Plus/Plus
Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212
||| || |||||||||| || || | || || ||||| |||| || |||||||||||
Sbjct 37337 TTTGTCAACAGTAAACTGAATAGCGTTTGCAGCAGGTTTTGTTCGCAAGTAATACATTCC 37396
Query 138213 CGTTTTTAACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272
||||| | |||| | ||| | ||| | ||||||||||| ||| | || | ||
Sbjct 37397 TGTTTTAAGCCCAGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCATAGTTGGG 37456
Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332
| |||| || ||||| || ||||| ||||| || ||||| || | |||| ||
Sbjct 37457 CTCTGCCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTATCAGCAGC 37516
Query 138333 CATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATATG 138392
||| || ||| |||| || ||||| ||||||||||| | || || | ||
Sbjct 37517 CATTTTTATTGTTGATTTAACGGAGATTTCCCATACGGTCTTGTACAAGTCTCGGACGTG 37576
Query 138393 TCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCAT 138452
| | || || | |||| |||||||| || | | || || | || ||||
Sbjct 37577 TTGAGGAATAGAATCAATGTTTTGAATAGAACCACGGCTTGATATTATTTGGTTCTTCAT 37636
Query 138453 GTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTG 138512
||| || | | || | ||| | |||| || || || | |||| || ||
Sbjct 37637 GTCGTCATCCCATAGGTCCAATTCTGTCAAATCTCGTAGTAGGTGATGATTTACTACTTG 37696
Query 138513 AAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTC 138572
|||||||| | || || || | |||||| || ||| | ||||| || |||||
Sbjct 37697 GAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTCGAAGGATTC 37756
Query 138573 GTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATT 138632
|| || |||| || || || |||| || || ||||| || | | | ||||||
Sbjct 37757 ATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAGCAAAGAATT 37816
Query 138633 CCGTAAACCGTGAAGCTTGATT--CGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTA 138690
|| | ||||| ||| ||| |||| || || | ||||||||| ||||| |
Sbjct 37817 GCGAACGCCGTGTTTCTTAATTGACGTT--TTAAGTGTATTCCAGTCCCATAAATCTGTT 37874
Query 138691 GGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGTAC 138750
|| |||| |||||||| || |||||||| || || ||| | || |||||||| ||
Sbjct 37875 GGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCACTGGGCTGCCTTCATAT 37934
Query 138751 GAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAA 138810
| ||||| ||| ||||| || | |||| || ||||||||||| ||| | ||
Sbjct 37935 GTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGCTCCAAAATAT 37994
Query 138811 ATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGG 138870
|| || ||| ||||||||| || || | ||||| |||| ||||| || || |
Sbjct 37995 ATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCGTAAGG-ATAC-- 38051
Query 138871 AGCATCGTGAAC---GCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGC 138927
|||| || | || ||||| | || || || || | ||| | ||| || || |
Sbjct 38052 CGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGACGGTGCCTT 38111
Query 138928 AGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAA 138987
| || || ||| || || | ||||||| |||| | ||| || |||||||| ||
Sbjct 38112 AAGTTCGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTATTTTGTTCAAG 38171
Query 138988 TTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTG 139047
||| || | ||| || || || ||| || ||| |||||| | ||
Sbjct 38172 TTTTTTGTAACAATCTTTGTTACATCTTTCAATTTTTTAAAGTCGTATTT------TTTT 38225
Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107
||| | || |||||| | |||| || || |||| |||||| || || | |
Sbjct 38226 TCG-----GGAGT-GACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAATT 38279
Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167
|| || ||| || || || |||||||||| ||| ||||| || || || || || ||
Sbjct 38280 TCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTCCA 38339
Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227
| ||||||||||| ||||| || ||||| | ||||||| | |||||||| || || |||
Sbjct 38340 ACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTACCA 38399
Query 139228 GTTTCCACTTGTGTCTCTATAAT 139250
||||| ||||| | ||| || ||
Sbjct 38400 GTTTCTACTTGAGACTCAATTAT 38422
Score = 136 bits (150), Expect = 4e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || |||| || ||||| || || || || || || || || ||| | |
Sbjct 7086 ATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTCG 7027
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| ||| | |||| || ||| ||||| || |||||||| ||||| ||||| ||||||
Sbjct 7026 GATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCAA 6967
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| |||||||||| || ||||| |||| ||| | | |||| || || |||
Sbjct 6966 CAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAAC 6907
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|||||||| || || ||| | |||||||||
Sbjct 6906 ATTCAAAAAGAGTCTACATTGCACTTGGTG 6877
>seq30232
Length=15380
Score = 131 bits (144), Expect = 2e-25
Identities = 170/232 (73%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || || || || || |||||||| || || |
Sbjct 15102 ATGCAGATCTTCGTCAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15043
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || |||||||||||||| ||||| || || || |||||
Sbjct 15042 GATACCATTGAGAATGTTAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGATCAG 14983
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880
|| ||||||||||| || || || ||||||||||| || || || |||| || ||
Sbjct 14982 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGA--CG-GACGCACTTTGTCCGACTAC 14926
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCG 24932
||||| || ||||| || ||| | ||||||||| | || |||||||| ||||
Sbjct 14925 AACATCCAGAAGGAGTCCACATTGCACTTGGTGCTCCGTTTGCGCGGTGGCG 14874
Score = 102 bits (112), Expect = 7e-17
Identities = 152/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || | || || || || || || |||||||| || || |
Sbjct 15330 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15271
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| |||||||| ||||| || || || |||||
Sbjct 15270 GATACCATTGAGAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 15211
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880
|| ||||||||||| || || || ||||||||||| || || || |||| || ||
Sbjct 15210 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGA--CG-GACGCACTCTGTCCGACTAC 15154
Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| || ||||| || || | || ||||||
Sbjct 15153 AACATCCAGAAGGAGTCCACTTTGCATTTGGTG 15121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449705268776000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |