Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq22953 140 3e-28
seq20705 96.9 3e-15
>seq22953
Length=19288
Score = 140 bits (154), Expect = 3e-28
Identities = 158/210 (75%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496
||||| |||||||| || |||| ||||| || || || || || || || |||| ||
Sbjct 3920 ATCGAATTGCGTTTGGGCACCCAATTCGCAACCAAAATATTTGGTAGGATATGTGGCAGG 3979
Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556
|||||||| ||| || | ||| | ||| || |||| || ||||| ||||| |||||
Sbjct 3980 ACGTCCAATAGCCCGCGCAACTTCAGCCATATTTACGAGCACGGTCTTAATGCCATTGCC 4039
Query 34557 CTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614
||| || ||||||||||| |||| ||||||||||||||| |||||||| |||| |
Sbjct 4040 CTTACCCTCGACCTTGGCCTGCAG--GCGCGGCATTTTGTAACGGTAGAAAATATCCGTC 4097
Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCATC 34644
||| | ||||| || || || || |||||
Sbjct 4098 ACACTTCGGTTTACATTAACGGTGGCCATC 4127
Score = 96.9 bits (106), Expect = 3e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 34255 CCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATG 34314
|||||| |||||||||| ||||| || | || | | ||||| || || ||| |
Sbjct 2419 CCGTGAAAACCGCATGCCTTGCAAGATTGGGAAATGGTTTGGTTTTTGGCCGATACGCTC 2478
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
| | ||||| || ||||| |||||||| ||||||||||||||||| || || |||||
Sbjct 2479 AAGTTGGTCTCAGGATTGTCGCATTCCGGGCACAACACAAACTTGCGAATAAATCCATCC 2538
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
| || || || |||||| | ||| || || || || || || || ||||| ||
Sbjct 2539 AAAAGATCTTGCAACTTATTGACGTCATGCGAACCATTAACAATAAAACGTTCATT 2594
>seq20705
Length=54059
Score = 96.9 bits (106), Expect = 3e-15
Identities = 148/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || || || || || |||| ||||| ||||| ||| | || || |||
Sbjct 7087 AATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTC 7028
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||||| ||| | || ||| |||||| |||||||| || | || |||||
Sbjct 7027 GGATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCA 6968
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|||| | || || | ||| || ||||| |||| |||| | || || | || |||||
Sbjct 6967 ACAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAA 6908
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTG 110482
|||||||||||| ||||| |||||| |||||
Sbjct 6907 CATTCAAAAAGAGTCTACATTGCACTTGGTG 6877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412669522460600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |