Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq22704 120 5e-21 seq3725 98.7 2e-14 >seq22704 Length=12761 Score = 120 bits (132), Expect = 5e-21 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625 || || |||||||||||||||||| | ||||| | ||| | ||||| ||| Sbjct 10403 GAGAAACGCACCGACGACATTTCGTCTTGGGATGCCGATTTTCTTAAAGTCGATCAAGGA 10462 Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685 || ||||| || |||||| | || || |||||| | || || || | ||||| ||| Sbjct 10463 ACACTCTTCGAATTGATCTTGGCTGCAAACTACTTGGATATTAAAGGGTTACTCGAGTTG 10522 Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745 |||||||| |||||||| | || || || ||| | |||||||| |||||||||||| Sbjct 10523 ACCTGCAAGACTGTGGCCAATATGATAAAAGGAAAGACTCCCGAGGAGATCCGCAAGACC 10582 Query 2035746 TTTAACATCAA 2035756 ||||||||||| Sbjct 10583 TTTAACATCAA 10593 >seq3725 Length=29921 Score = 98.7 bits (108), Expect = 2e-14 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 2411826 CCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCG 2411885 ||| |||| ||| ||||| || | |||||||| ||||||||| || || | || Sbjct 16293 CCATGGCGCCTTCATGTTGTCCAGATAGGCGTGCAAGTCGGCAAAAAGAATGGTACCCTC 16352 Query 2411886 ACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCCCAGATGGGG 2411945 ||| ||||||| ||| ||||| || | || | ||||||||||||||| ||| ||| || Sbjct 16353 ACAGCCGGCCTTGAGGAAGTCCGCTATCTTTGACATGGGCACAAAGTAGGCCACATGAGG 16412 Query 2411946 CTTGCCCGTCGGCGCGGTGCCCCAATAAA 2411974 |||||| || | || || ||||| |||| Sbjct 16413 CTTGCCGGTTGTTGCAGTTCCCCAGTAAA 16441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7912608390013800