Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq22704 120 5e-21
seq3725 98.7 2e-14
>seq22704
Length=12761
Score = 120 bits (132), Expect = 5e-21
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 2035566 GACAAGCGCACCGACGACATTTCGCCGTGGGACAAGGCCTTTTGCGAGGTCGACCAACCC 2035625
|| || |||||||||||||||||| | ||||| | ||| | ||||| |||
Sbjct 10403 GAGAAACGCACCGACGACATTTCGTCTTGGGATGCCGATTTTCTTAAAGTCGATCAAGGA 10462
Query 2035626 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTG 2035685
|| ||||| || |||||| | || || |||||| | || || || | ||||| |||
Sbjct 10463 ACACTCTTCGAATTGATCTTGGCTGCAAACTACTTGGATATTAAAGGGTTACTCGAGTTG 10522
Query 2035686 GGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACC 2035745
|||||||| |||||||| | || || || ||| | |||||||| ||||||||||||
Sbjct 10523 ACCTGCAAGACTGTGGCCAATATGATAAAAGGAAAGACTCCCGAGGAGATCCGCAAGACC 10582
Query 2035746 TTTAACATCAA 2035756
|||||||||||
Sbjct 10583 TTTAACATCAA 10593
>seq3725
Length=29921
Score = 98.7 bits (108), Expect = 2e-14
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 2411826 CCACGGCGTCTTGCCATTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCG 2411885
||| |||| ||| ||||| || | |||||||| ||||||||| || || | ||
Sbjct 16293 CCATGGCGCCTTCATGTTGTCCAGATAGGCGTGCAAGTCGGCAAAAAGAATGGTACCCTC 16352
Query 2411886 ACATCCGGCCTGGAGAAAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCCCAGATGGGG 2411945
||| ||||||| ||| ||||| || | || | ||||||||||||||| ||| ||| ||
Sbjct 16353 ACAGCCGGCCTTGAGGAAGTCCGCTATCTTTGACATGGGCACAAAGTAGGCCACATGAGG 16412
Query 2411946 CTTGCCCGTCGGCGCGGTGCCCCAATAAA 2411974
|||||| || | || || ||||| ||||
Sbjct 16413 CTTGCCGGTTGTTGCAGTTCCCCAGTAAA 16441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7912608390013800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |