Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq30232 93.3 3e-14 >seq30232 Length=15380 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| ||||||||| ||||| ||||| || | |||| | || Sbjct 14891 AGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCC 14950 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| || |||||||||| || ||||| ||| | || | || |||||||| Sbjct 14951 TCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCT 15010 Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943 | || || || || || || || | || || ||| || || | || |||| Sbjct 15011 TGGATCTTGGCCTTAAC--ATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGG 15068 Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||| || || | |||||| || ||||||||||| Sbjct 15069 TCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| || || |||| | || ||||| ||||| || ||||| Sbjct 15139 CTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAA 15198 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| ||| | || | || |||||||| | || || || || | Sbjct 15199 GATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGCCTTAAC--A 15256 Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | || || | || || ||| || || | || |||||||| || || | |||||| Sbjct 15257 TTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTC 15316 Query 34964 ACAAAGATCTGCAT 34977 || ||||||||||| Sbjct 15317 ACGAAGATCTGCAT 15330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325557047169800