Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq4982 367 1e-95
seq30905 122 7e-22
seq2802 120 2e-21
seq14783 114 1e-19
seq1773 100 2e-15
>seq4982
Length=30196
Score = 367 bits (406), Expect = 1e-95
Identities = 974/1468 (66%), Gaps = 26/1468 (2%)
Strand=Plus/Minus
Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485
|| || ||||| | |||||| ||||| || | ||| || || || |||||||| || ||
Sbjct 21375 GCGGTGACATTCAAAATACCGTTGGCGTCAATATCGAAAGTTACCTCAATTTGGGGTACA 21316
Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545
|| | | || || || || || || | || | |||| ||| ||||| ||
Sbjct 21315 CCACGTGGTGCTGGAGGAATGCCCGACAGCTCGAACTTGCCCAAGAGATTGTTATCCTTT 21256
Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605
|| | || ||||||||| | | || || || ||| ||||| || || ||
Sbjct 21255 GTCATCGCACGCTCACCCTCGTACACCTGAATCAACACACCAGGCTGATTGTCGGAGTAG 21196
Query 281606 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664
|| || ||| |||| | | || || || || ||||| | | |||| |
Sbjct 21195 GTGGTGAATG-TCTGCGTCTGCTTGGTTGGGATGGTGGTGTTGCGCTTGATAAGCACACT 21137
Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724
||| | |||||| || ||||| | ||| || || || || || ||||| | || | ||
Sbjct 21136 CATCACACCACCGGCCGTTTCGATACCCAGGGAGAGGGGCGTAACATCGAGCAGCAAAAG 21077
Query 281725 ATTTTGAAGTTTTTCATCAG-TTTG--ACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781
|| || | || | | || |||| |||| ||||| || || || | ||| |||||
Sbjct 21076 ATCCTGCACTT---CCTGAGATTTGTCACCATGCAGAATGGCAGCCTGCACAGCGGCACC 21020
Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 281840
||| || ||||| || || ||||||| || | || | || || |||||||| | |
Sbjct 21019 ATAAGCCACAGCCTCGTCGGGATTAATAGACTTGTTCAATTCCTTGCCATTGAACAGGTC 20960
Query 281841 TTGAA--AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898
||| | ||| |||| ||||| || ||||||| || || || || || ||||| ||
Sbjct 20959 TTGCAGGAGACGTTGC---ACCTTGGGGATACGAGTGGAGCCGCCGACCAACACAATATC 20903
Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958
|| | || || ||||| || | ||| | | | ||||| ||||| || | |
Sbjct 20902 GTGAATGGCAGACTTGTCCAGCTTGGCATCACGAAGAGCCTTTTCCACGGGGTCCATAGT 20843
Query 281959 AGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TA 282016
||| | ||||| || | | ||||| ||||| || | ||| || || | ||
Sbjct 20842 -GCTGCGGAACAAATCAGCATTCAGTTCCTCGAAGCGTGCACGAGT--GATCGAAGTGTA 20786
Query 282017 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075
|| || | || ||||||||||| |||| ||||| ||| ||||| || ||||| ||
Sbjct 20785 GAAATCGGTACCCTCGAACAAAGAGTCAATCTCAATGCTAGCCTGAGTGGACGAAGAGAG 20726
Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT- 282134
| ||| || || ||||| || || || | || | || || || ||| ||| |
Sbjct 20725 AGTACGCTTTGCGCGTTCGCAGGCAGTGCGCAGACGACGCAATGCAC--GCTTGTTGGTG 20668
Query 282135 -TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 282193
|||| || | || | ||| | |||||| |||| ||| | || || ||||| |||
Sbjct 20667 GTCAAGTCCTTCTTGTGTTTGCGCTTGAACTCTTGTACAAAGTGCGTGACCAGACGGTTA 20608
Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253
|| ||||| || || ||||| | || | ||| | ||| | | | || | ||| | ||
Sbjct 20607 TCGAAATCCTCGCCACCCAAATGGGTGTCTCCCGCCGTGGATTTGACCTCGAAGATGCCG 20548
Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313
|| |||| ||||| || | |||||| || ||||| |||| ||| ||||| || |||
Sbjct 20547 TCATCAATAGACAGAATGGAGACATCAAAAGTACCACCGCCCAAATCGAAAATGAGCACA 20488
Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373
|| || | || ||||| |||||||| |||| ||||| || || || ||
Sbjct 20487 TTACGCTCGCCAACAGCCTTCTTATCCAGACCATAAGCAATGGCAGCGGCCGTAGGCTCG 20428
Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433
|| ||||| | ||| ||||| | ||| || || | || ||||| || || || || |
Sbjct 20427 TTTATAATACGCAACACATTTAAACCGGCGATGGTACCAGCATCCTTGGTCGCCTGACGC 20368
Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493
||||||||||| || || ||||| ||||| || ||||||| || || || || |
Sbjct 20367 TGTGAATCGTTGAAGTAAGCAGGCACAGTGATGACGGCATTGGTCACCGTCTTGCCCAGG 20308
Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAA 282553
||||| || || | ||||| || | | || ||| || || || | || || |||
Sbjct 20307 TAAGCCTCGGCAGTCTCCTTCATCTTGGTAAGAACCATGGAGGAGATCTCCTCGGG-GAA 20249
Query 282554 TATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612
| | ||| ||||| || |||| || |||| | ||| || | |||| | |
Sbjct 20248 GAAGGTCTTCTTTTCATCTTTGTATGTAACCTCAATCTTTGGCTTGCCATCAACGCTGAC 20189
Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672
|| | || ||||| | |||||||| || || ||| || | ||| | | |||
Sbjct 20188 CACCTCGAAAGGCCAGTGCTTCATATCCGACTGCACAGCCGAATCGTCAAACTTGCGACC 20129
Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732
||| | || || ||||| || || || | |||||| || | || | || | ||||||
Sbjct 20128 AATGAGACGCTTGGCATCGAAGATTGTTTGGGTTGGGTTCATCGCCACCTGGTTTTTGGC 20069
Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792
||||| ||||||| | | |||||||| || || | |||||| ||||| ||||| |||||
Sbjct 20068 AGCATCACCAATCAAACGCTCTGTCTCCGTGAAGGCAACATAGGATGGTGTTGTACGATT 20009
Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852
||| ||||| || |||||||| |||||||| |||| ||| | ||||| || ||| |
Sbjct 20008 ACCCTGATCGTTGGCAATAATCTCAACTTTGCCATGTTGGAACACACCCACGCAAGAGTA 19949
Query 282853 AGTTGTTCCTAAATCAATACCAATAGCA 282880
|| || || ||||||||||||| ||||
Sbjct 19948 GGTCGTGCCCAAATCAATACCAACAGCA 19921
>seq30905
Length=22795
Score = 122 bits (134), Expect = 7e-22
Identities = 120/155 (77%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 637135 TCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACTATTATTGGT 637194
|| || ||||||||||| || | ||||| |||| ||||||||||| ||||| |||||
Sbjct 18125 TCCTCCCCAAATATTGCCAAGCAGATGCACGTTGGCCATTTAAGATCGACTATAATTGGC 18066
Query 637195 GAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATTAATCATGTG 637254
||||| ||| |||| | || ||| | | | |||||||| ||||||||| ||| ||
Sbjct 18065 GAATCCATTAGTAGACTGTTGGAATTTTTAGAGCACGATGTGCTTCGTATTAACCATTTG 18006
Query 637255 GGTGATTGGGGAACTCAATTCGGTATGTTAATTGC 637289
||||||||||| || || || || ||||| |||||
Sbjct 18005 GGTGATTGGGGCACGCAGTTTGGCATGTTGATTGC 17971
Score = 98.7 bits (108), Expect = 7e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 637168 GGACATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGA 637227
|| ||||||||||| ||||| ||||| ||||| ||| |||| | || ||| | | |
Sbjct 17852 GGCCATTTAAGATCGACTATAATTGGCGAATCCATTAGTAGACTGTTGGAATTTTTAGAG 17793
Query 637228 CACGATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATT 637287
|||||||| ||||||||| ||| ||||||||||||| || || || || ||||| |||
Sbjct 17792 CACGATGTGCTTCGTATTAACCATTTGGGTGATTGGGGCACGCAGTTTGGCATGTTGATT 17733
Query 637288 GC 637289
||
Sbjct 17732 GC 17731
>seq2802
Length=25935
Score = 120 bits (132), Expect = 2e-21
Identities = 238/350 (68%), Gaps = 3/350 (1%)
Strand=Plus/Minus
Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252
||| ||||||||||| ||||| | ||||| || || ||| || | ||| | ||
Sbjct 20560 ATCGAAATCTTCACCGCCCAAATGAGTATCACCATTAGTGGCTACCACCTCGAACACACC 20501
Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312
|| |||| | || || | ||||| ||| || || |||| ||| || | ||| ||
Sbjct 20500 ATTGTCAATTGTCAGCAGGGAGACATCGAAGGTACCGCCGCCCAAATCGAACACAAGCAC 20441
Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372
|| ||||| | | | || || || |||||||| |||| ||||| ||||| |||||
Sbjct 20440 GTT--TTTCTC-GCCCTCTTTCTTGTCCAGACCATAGGCAATGGCAGCTGCAGTGGGTTC 20384
Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432
|| || || | || || | ||||||||||| || ||||| || || ||||| |
Sbjct 20383 GTTGATGATGCGCATCACCTGTAGACCAGCAATGACACCGGCATCCTTGGTAGCTTGACG 20324
Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492
|||| ||| || || || ||||| || || | || |||| ||| |||| || ||||
Sbjct 20323 CTGTGCATCATTGAAGTAGGCAGGGACTGTGACGACAGCATGTGTGACTTTCTTGCCAAG 20264
Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 282542
||| || || |||| ||||| || | || | ||| | |||||||
Sbjct 20263 ATAGGCTTCGGCAGTTTCCTTCATCTTGCCCAACACCATGGCAGAAATTT 20214
>seq14783
Length=131557
Score = 114 bits (126), Expect = 1e-19
Identities = 110/141 (78%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381
|||||| | | ||||||| | |||||| || || || || || || |||||||||||||
Sbjct 77732 TTTGTCCTCGGTTTTATCCATACCATAGGCCAACGCCGCCGCTGTGGGTTCATTAATAAC 77791
Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441
| ||| ||||| | |||||||||| || ||||| || || || |||| |||||||||
Sbjct 77792 ACGCAACACATTCAAACCAGCAATTTGACCAGCATCCTTTGTTGCCTGTCGTTGTGAATC 77851
Query 282442 GTTAAAATATGCAGGAACAGT 282462
||| || || ||||| |||||
Sbjct 77852 GTTGAAGTAAGCAGGCACAGT 77872
>seq1773
Length=122071
Score = 100 bits (110), Expect = 2e-15
Identities = 349/542 (64%), Gaps = 7/542 (1%)
Strand=Plus/Minus
Query 282157 CTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAAT 282214
|||||| || || ||| | ||| | || || ||||||||||| || || || |||||
Sbjct 70879 CTTGAACTCATCCACAAA--ATGATTAACCAGTCGATTATCAAAGTCCTCCCCACCCAAG 70822
Query 282215 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---CCATCTTCAAGAGACAAAAGA 282271
| |||| || | ||| || | || || || || || || | | ||| | |
Sbjct 70821 TGGGTATCCCCAGCCGTTGCCTTCACCACAAACAGAGAGCCCTCATCGATACACAGTATA 70762
Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331
| ||||| ||| || || |||| |||||| || || || || ||| | |
Sbjct 70761 GATACATCGAAGGTGCCGCCGCCCAAATCAAAGATTAGCACGTTGCGCTCTCCCTTAAGA 70702
Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391
||||| || || || || || | ||| || || ||||||||||| ||||| | || |||
Sbjct 70701 TTTTTGTCCAGCCCGTAGGCCAGAGCCGCTGCTGTTGGTTCATTGATAATGCGCAGGACA 70642
Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451
|| ||||| || || | || ||||| || || || || | ||| ||||| |||||
Sbjct 70641 TTGAGACCCGCTATGGTGCCCGCATCCTTTGTAGCCTGGCGTTGGCTGTCGTTGAAATAC 70582
Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511
|| || || || || || || || | |||| | || | ||| | || |||
Sbjct 70581 GCTGGTACTGTGATTACCGCGTCCTTAACTTTTCCGCCCAAATAGACCTCCGCGATTTCA 70522
Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTT 282571
|||||| | |||| ||| || |||| ||| || | | | ||||| |||
Sbjct 70521 CGCATTTTTGTCAAAACCATCGAGCTGATTTCTTCCGGTGCAAAACGCTTGCGTTCTCCC 70462
Query 282572 TGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATAT 282631
| | | || || | | ||| || ||| | || || ||||| || ||||||| |
Sbjct 70461 TTAAACTCGACCTCGATCTTTGGCTTGCCACCGTCGTTGATCACTTTGAAGGGCCAATGT 70402
Query 282632 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 282691
||||||||| |||| | |||||| || | | ||||| || || || ||||||
Sbjct 70401 TTCATATCTTCCTGAATCTTGCGGTCATCGAATTTGCGTCCAATCAAGCGCTTAGCATCA 70342
Query 282692 AA 282693
||
Sbjct 70341 AA 70340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3738951324529200
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