Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4982 367 1e-95 seq30905 122 7e-22 seq2802 120 2e-21 seq14783 114 1e-19 seq1773 100 2e-15 >seq4982 Length=30196 Score = 367 bits (406), Expect = 1e-95 Identities = 974/1468 (66%), Gaps = 26/1468 (2%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 || || ||||| | |||||| ||||| || | ||| || || || |||||||| || || Sbjct 21375 GCGGTGACATTCAAAATACCGTTGGCGTCAATATCGAAAGTTACCTCAATTTGGGGTACA 21316 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | | || || || || || || | || | |||| ||| ||||| || Sbjct 21315 CCACGTGGTGCTGGAGGAATGCCCGACAGCTCGAACTTGCCCAAGAGATTGTTATCCTTT 21256 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 281605 || | || ||||||||| | | || || || ||| ||||| || || || Sbjct 21255 GTCATCGCACGCTCACCCTCGTACACCTGAATCAACACACCAGGCTGATTGTCGGAGTAG 21196 Query 281606 GTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGT 281664 || || ||| |||| | | || || || || ||||| | | |||| | Sbjct 21195 GTGGTGAATG-TCTGCGTCTGCTTGGTTGGGATGGTGGTGTTGCGCTTGATAAGCACACT 21137 Query 281665 CATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 281724 ||| | |||||| || ||||| | ||| || || || || || ||||| | || | || Sbjct 21136 CATCACACCACCGGCCGTTTCGATACCCAGGGAGAGGGGCGTAACATCGAGCAGCAAAAG 21077 Query 281725 ATTTTGAAGTTTTTCATCAG-TTTG--ACCAACAAGAATAGCTGCTTGAATAGCAGCACC 281781 || || | || | | || |||| |||| ||||| || || || | ||| ||||| Sbjct 21076 ATCCTGCACTT---CCTGAGATTTGTCACCATGCAGAATGGCAGCCTGCACAGCGGCACC 21020 Query 281782 ATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT- 281840 ||| || ||||| || || ||||||| || | || | || || |||||||| | | Sbjct 21019 ATAAGCCACAGCCTCGTCGGGATTAATAGACTTGTTCAATTCCTTGCCATTGAACAGGTC 20960 Query 281841 TTGAA--AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 281898 ||| | ||| |||| ||||| || ||||||| || || || || || ||||| || Sbjct 20959 TTGCAGGAGACGTTGC---ACCTTGGGGATACGAGTGGAGCCGCCGACCAACACAATATC 20903 Query 281899 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 281958 || | || || ||||| || | ||| | | | ||||| ||||| || | | Sbjct 20902 GTGAATGGCAGACTTGTCCAGCTTGGCATCACGAAGAGCCTTTTCCACGGGGTCCATAGT 20843 Query 281959 AGCT-CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TA 282016 ||| | ||||| || | | ||||| ||||| || | ||| || || | || Sbjct 20842 -GCTGCGGAACAAATCAGCATTCAGTTCCTCGAAGCGTGCACGAGT--GATCGAAGTGTA 20786 Query 282017 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 || || | || ||||||||||| |||| ||||| ||| ||||| || ||||| || Sbjct 20785 GAAATCGGTACCCTCGAACAAAGAGTCAATCTCAATGCTAGCCTGAGTGGACGAAGAGAG 20726 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT- 282134 | ||| || || ||||| || || || | || | || || || ||| ||| | Sbjct 20725 AGTACGCTTTGCGCGTTCGCAGGCAGTGCGCAGACGACGCAATGCAC--GCTTGTTGGTG 20668 Query 282135 -TCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTA 282193 |||| || | || | ||| | |||||| |||| ||| | || || ||||| ||| Sbjct 20667 GTCAAGTCCTTCTTGTGTTTGCGCTTGAACTCTTGTACAAAGTGCGTGACCAGACGGTTA 20608 Query 282194 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 282253 || ||||| || || ||||| | || | ||| | ||| | | | || | ||| | || Sbjct 20607 TCGAAATCCTCGCCACCCAAATGGGTGTCTCCCGCCGTGGATTTGACCTCGAAGATGCCG 20548 Query 282254 TCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 282313 || |||| ||||| || | |||||| || ||||| |||| ||| ||||| || ||| Sbjct 20547 TCATCAATAGACAGAATGGAGACATCAAAAGTACCACCGCCCAAATCGAAAATGAGCACA 20488 Query 282314 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 282373 || || | || ||||| |||||||| |||| ||||| || || || || Sbjct 20487 TTACGCTCGCCAACAGCCTTCTTATCCAGACCATAAGCAATGGCAGCGGCCGTAGGCTCG 20428 Query 282374 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 282433 || ||||| | ||| ||||| | ||| || || | || ||||| || || || || | Sbjct 20427 TTTATAATACGCAACACATTTAAACCGGCGATGGTACCAGCATCCTTGGTCGCCTGACGC 20368 Query 282434 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATA 282493 ||||||||||| || || ||||| ||||| || ||||||| || || || || | Sbjct 20367 TGTGAATCGTTGAAGTAAGCAGGCACAGTGATGACGGCATTGGTCACCGTCTTGCCCAGG 20308 Query 282494 TAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAA 282553 ||||| || || | ||||| || | | || ||| || || || | || || ||| Sbjct 20307 TAAGCCTCGGCAGTCTCCTTCATCTTGGTAAGAACCATGGAGGAGATCTCCTCGGG-GAA 20249 Query 282554 TATTG-CTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAAT 282612 | | ||| ||||| || |||| || |||| | ||| || | |||| | | Sbjct 20248 GAAGGTCTTCTTTTCATCTTTGTATGTAACCTCAATCTTTGGCTTGCCATCAACGCTGAC 20189 Query 282613 AACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACC 282672 || | || ||||| | |||||||| || || ||| || | ||| | | ||| Sbjct 20188 CACCTCGAAAGGCCAGTGCTTCATATCCGACTGCACAGCCGAATCGTCAAACTTGCGACC 20129 Query 282673 AATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGC 282732 ||| | || || ||||| || || || | |||||| || | || | || | |||||| Sbjct 20128 AATGAGACGCTTGGCATCGAAGATTGTTTGGGTTGGGTTCATCGCCACCTGGTTTTTGGC 20069 Query 282733 TGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 282792 ||||| ||||||| | | |||||||| || || | |||||| ||||| ||||| ||||| Sbjct 20068 AGCATCACCAATCAAACGCTCTGTCTCCGTGAAGGCAACATAGGATGGTGTTGTACGATT 20009 Query 282793 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 282852 ||| ||||| || |||||||| |||||||| |||| ||| | ||||| || ||| | Sbjct 20008 ACCCTGATCGTTGGCAATAATCTCAACTTTGCCATGTTGGAACACACCCACGCAAGAGTA 19949 Query 282853 AGTTGTTCCTAAATCAATACCAATAGCA 282880 || || || ||||||||||||| |||| Sbjct 19948 GGTCGTGCCCAAATCAATACCAACAGCA 19921 >seq30905 Length=22795 Score = 122 bits (134), Expect = 7e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 637135 TCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACTATTATTGGT 637194 || || ||||||||||| || | ||||| |||| ||||||||||| ||||| ||||| Sbjct 18125 TCCTCCCCAAATATTGCCAAGCAGATGCACGTTGGCCATTTAAGATCGACTATAATTGGC 18066 Query 637195 GAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATTAATCATGTG 637254 ||||| ||| |||| | || ||| | | | |||||||| ||||||||| ||| || Sbjct 18065 GAATCCATTAGTAGACTGTTGGAATTTTTAGAGCACGATGTGCTTCGTATTAACCATTTG 18006 Query 637255 GGTGATTGGGGAACTCAATTCGGTATGTTAATTGC 637289 ||||||||||| || || || || ||||| ||||| Sbjct 18005 GGTGATTGGGGCACGCAGTTTGGCATGTTGATTGC 17971 Score = 98.7 bits (108), Expect = 7e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 637168 GGACATTTAAGATCAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGA 637227 || ||||||||||| ||||| ||||| ||||| ||| |||| | || ||| | | | Sbjct 17852 GGCCATTTAAGATCGACTATAATTGGCGAATCCATTAGTAGACTGTTGGAATTTTTAGAG 17793 Query 637228 CACGATGTTTATCGTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATT 637287 |||||||| ||||||||| ||| ||||||||||||| || || || || ||||| ||| Sbjct 17792 CACGATGTGCTTCGTATTAACCATTTGGGTGATTGGGGCACGCAGTTTGGCATGTTGATT 17733 Query 637288 GC 637289 || Sbjct 17732 GC 17731 >seq2802 Length=25935 Score = 120 bits (132), Expect = 2e-21 Identities = 238/350 (68%), Gaps = 3/350 (1%) Strand=Plus/Minus Query 282193 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 282252 ||| ||||||||||| ||||| | ||||| || || ||| || | ||| | || Sbjct 20560 ATCGAAATCTTCACCGCCCAAATGAGTATCACCATTAGTGGCTACCACCTCGAACACACC 20501 Query 282253 ATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTAC 282312 || |||| | || || | ||||| ||| || || |||| ||| || | ||| || Sbjct 20500 ATTGTCAATTGTCAGCAGGGAGACATCGAAGGTACCGCCGCCCAAATCGAACACAAGCAC 20441 Query 282313 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 282372 || ||||| | | | || || || |||||||| |||| ||||| ||||| ||||| Sbjct 20440 GTT--TTTCTC-GCCCTCTTTCTTGTCCAGACCATAGGCAATGGCAGCTGCAGTGGGTTC 20384 Query 282373 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 282432 || || || | || || | ||||||||||| || ||||| || || ||||| | Sbjct 20383 GTTGATGATGCGCATCACCTGTAGACCAGCAATGACACCGGCATCCTTGGTAGCTTGACG 20324 Query 282433 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAAT 282492 |||| ||| || || || ||||| || || | || |||| ||| |||| || |||| Sbjct 20323 CTGTGCATCATTGAAGTAGGCAGGGACTGTGACGACAGCATGTGTGACTTTCTTGCCAAG 20264 Query 282493 ATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTT 282542 ||| || || |||| ||||| || | || | ||| | ||||||| Sbjct 20263 ATAGGCTTCGGCAGTTTCCTTCATCTTGCCCAACACCATGGCAGAAATTT 20214 >seq14783 Length=131557 Score = 114 bits (126), Expect = 1e-19 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 282322 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 |||||| | | ||||||| | |||||| || || || || || || ||||||||||||| Sbjct 77732 TTTGTCCTCGGTTTTATCCATACCATAGGCCAACGCCGCCGCTGTGGGTTCATTAATAAC 77791 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | ||| ||||| | |||||||||| || ||||| || || || |||| ||||||||| Sbjct 77792 ACGCAACACATTCAAACCAGCAATTTGACCAGCATCCTTTGTTGCCTGTCGTTGTGAATC 77851 Query 282442 GTTAAAATATGCAGGAACAGT 282462 ||| || || ||||| ||||| Sbjct 77852 GTTGAAGTAAGCAGGCACAGT 77872 >seq1773 Length=122071 Score = 100 bits (110), Expect = 2e-15 Identities = 349/542 (64%), Gaps = 7/542 (1%) Strand=Plus/Minus Query 282157 CTTGAAATCTTCAACACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAAT 282214 |||||| || || ||| | ||| | || || ||||||||||| || || || ||||| Sbjct 70879 CTTGAACTCATCCACAAA--ATGATTAACCAGTCGATTATCAAAGTCCTCCCCACCCAAG 70822 Query 282215 TTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT---CCATCTTCAAGAGACAAAAGA 282271 | |||| || | ||| || | || || || || || || | | ||| | | Sbjct 70821 TGGGTATCCCCAGCCGTTGCCTTCACCACAAACAGAGAGCCCTCATCGATACACAGTATA 70762 Query 282272 GTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG 282331 | ||||| ||| || || |||| |||||| || || || || ||| | | Sbjct 70761 GATACATCGAAGGTGCCGCCGCCCAAATCAAAGATTAGCACGTTGCGCTCTCCCTTAAGA 70702 Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || || || || || | ||| || || ||||||||||| ||||| | || ||| Sbjct 70701 TTTTTGTCCAGCCCGTAGGCCAGAGCCGCTGCTGTTGGTTCATTGATAATGCGCAGGACA 70642 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||| || || | || ||||| || || || || | ||| ||||| ||||| Sbjct 70641 TTGAGACCCGCTATGGTGCCCGCATCCTTTGTAGCCTGGCGTTGGCTGTCGTTGAAATAC 70582 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 || || || || || || || || | |||| | || | ||| | || ||| Sbjct 70581 GCTGGTACTGTGATTACCGCGTCCTTAACTTTTCCGCCCAAATAGACCTCCGCGATTTCA 70522 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTT 282571 |||||| | |||| ||| || |||| ||| || | | | ||||| ||| Sbjct 70521 CGCATTTTTGTCAAAACCATCGAGCTGATTTCTTCCGGTGCAAAACGCTTGCGTTCTCCC 70462 Query 282572 TGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATAT 282631 | | | || || | | ||| || ||| | || || ||||| || ||||||| | Sbjct 70461 TTAAACTCGACCTCGATCTTTGGCTTGCCACCGTCGTTGATCACTTTGAAGGGCCAATGT 70402 Query 282632 TTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCA 282691 ||||||||| |||| | |||||| || | | ||||| || || || |||||| Sbjct 70401 TTCATATCTTCCTGAATCTTGCGGTCATCGAATTTGCGTCCAATCAAGCGCTTAGCATCA 70342 Query 282692 AA 282693 || Sbjct 70341 AA 70340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738951324529200