Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 116 4e-21
>seq20705
Length=54059
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262
|| || || | |||||| |||||||| |||||||| ||| || |||| |||||
Sbjct 6878 ACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTCC 6937
Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322
| |||||| |||||| ||||||||||||| ||||| ||||| || || |||||||| |
Sbjct 6938 AATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGA 6997
Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382
|| || ||| | | ||| | || || | ||||| || |||| || | ||||||
Sbjct 6998 ATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTTG 7057
Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411
|| || | || || ||||| || |||||
Sbjct 7058 CCCGTTAGGGTCTTAACGAAAATCTGCAT 7086
Score = 114 bits (126), Expect = 1e-20
Identities = 472/734 (64%), Gaps = 19/734 (3%)
Strand=Plus/Plus
Query 150722 TTGACAACTTGAAATTCGCCCGACAAAACACGTCTCAAAAACAAATTAC-TGTGAAACGG 150780
|| || ||||| ||||| || || || || ||||| | | |||| |||| | |||
Sbjct 37686 TTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTA-CGG 37744
Query 150781 TTCAAATGACTCGTTGTTGTTGAGTATTTGTGCGGTCGTGGCCGTCGGCATGTACGCCAC 150840
|| || || || || || | |||||| || || | || || ||||| || |
Sbjct 37745 CTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAAT 37804
Query 150841 AAGCAATGAATTACGTAATCCGTATTTTTGTATATTTAT-TTTCAACTGTGA-CCAGTCC 150898
|||||| ||||| || | |||| ||| | || ||| | ||| || ||| |||||||
Sbjct 37805 AAGCAAAGAATTGCGAACGCCGTGTTTCT-TA-ATTGACGTTTTAAGTGTATTCCAGTCC 37862
Query 150899 CATAACGAAGTCGGTACCGTATTCCACAAATCGTATTGCAATATTCCTTCGCTCGCTTTG 150958
||||| || || ||||||||| || || || || || |||| ||| || |
Sbjct 37863 CATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCACTGGG 37922
Query 150959 CTACCGGCAAACGTGCTATAAGGCTCACTAACAGATGCCAGTTCGTAACTGGCCTCGAGC 151018
|| || || | || || || | ||| || ||| |||| |||||||||
Sbjct 37923 CTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGC 37982
Query 151019 GCAGCATGATACACAGTTTCAGCAATTTGTTTATTCAATAGAACGGCAGCATCGCTCACG 151078
|| || ||| | || || ||| || | || | ||| || ||||||| ||
Sbjct 37983 GCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCG 38042
Query 151079 TACGGTATGCGCAACATAACAAATGCATCGGCCAAACCTTGAATGCCTATGCCGATGGGA 151138
|| || |||| | | | ||||||||| || || |||| || || || || |||
Sbjct 38043 TAAGGATACCGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGA 38102
Query 151139 CGATGGCGCATATTAGAtttttttGCAGTTTCAATAGGGTAGAAATTGCGATCAATAATT 151198
|| || | | || |||||||| || | | ||| || || ||| |||||| |||
Sbjct 38103 CGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAGGATAAAAGTTGATATCAATTATT 38162
Query 151199 TTATTCAAACTATTCACTACA-TGTTTGACCACAGTGTGCAATAGTTGAAAATCAAAAGT 151257
|| ||||| | || ||| | |||| ||| | |||| || ||| || ||
Sbjct 38163 TTGTTCAAGTTTTTTGTAACAATCTTTGTT-ACATCTTTCAATTTTTTAAAGTC----GT 38217
Query 151258 ATCATTATT-------GATATATTTATTGACGGCAATCGACGCTAGATTACATACGGCAG 151310
|| || || || | | |||||| ||| || || |||| || || || |||
Sbjct 38218 ATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAA 38277
Query 151311 TTTCGTCGGGCGCGCAATATTGTACTATTTCCGCACACAAATTGCTGCATTTTATCAATC 151370
|||| || || ||| |||| | || ||||| | ||| |||||||||||||| || ||
Sbjct 38278 TTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTC 38337
Query 151371 CGCAATTACTTTGATTGCTTTTGCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGC 151430
| || |||||| |||||||| || || | || ||| | | ||| || || || |
Sbjct 38338 CAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTAC 38397
Query 151431 CGGTTTCGGCTTGA 151444
| ||||| |||||
Sbjct 38398 CAGTTTCTACTTGA 38411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488335147440000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |