Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq12991 96.9 4e-15
seq20407 89.7 5e-13
>seq12991
Length=13810
Score = 96.9 bits (106), Expect = 4e-15
Identities = 125/166 (75%), Gaps = 5/166 (3%)
Strand=Plus/Minus
Query 21735 CTCAGCTACGCATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGC 21793
||| ||| ||||| ||| ||||||| ||||| ||| ||| || ||||||| |||| |||
Sbjct 2390 CTCCGCT-CGCATTCCCCAAATAGGTGACAAATTCGCTTCGCGTCATGGCC-AGAAGGGC 2333
Query 21794 ACCTGCGGGATGATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCC 21853
|||||||| || | || || ||| | |||||||||| ||||| || |||
Sbjct 2332 ACCTGCGGCATTACGTACCGCCAGGAAGATCTGCCATTCACCAACGAAGGCATTACACCC 2273
Query 21854 GACATCATCATCAACCCCAACTGC-ATTCCCTCCAGAATGACCATT 21898
|||||||| || ||||| | ||| ||||||||| | |||||||||
Sbjct 2272 GACATCATTATTAACCCGCA-TGCTATTCCCTCCCGCATGACCATT 2228
>seq20407
Length=18981
Score = 89.7 bits (98), Expect = 5e-13
Identities = 116/158 (73%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 21741 TACGCATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGC 21799
|||||||||| |||| |||||||||||| || || || |||| |||||||||| |||
Sbjct 7493 TACGCATACCACAAATTGGCGACAAGTTCGCCTCACGTCACGGCC-AGAAAGGCACGTGC 7435
Query 21800 GGGATGATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATC 21859
|| || ||| || || ||||||| ||||| | || || | |||||||||
Sbjct 7434 GGTATTCAGTATCGCCAGGAGGACATGCCCTTCACTTGCGAGGGTCTGGCACCCGACATC 7375
Query 21860 ATCATCAACCCCAACTGCATTCCCTCCAGAATGACCAT 21897
||||| || ||| || ||||||||| | ||||| ||
Sbjct 7374 ATCATTAATCCCCACGCCATTCCCTCTCGTATGACAAT 7337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521322639256000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |