Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq10079 132 9e-26
>seq10079
Length=19992
Score = 132 bits (146), Expect = 9e-26
Identities = 184/255 (72%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 183055 GAAGGAAAAATGCATAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACA 183114
||||| ||||||||| | ||| | |||||||| ||||| |||||||| | ||||||||
Sbjct 12918 GAAGGCAAAATGCATGGATTTCTGCGAATGTATTGGGCCAAAAAGATTTTGGAATGGACC 12859
Query 183115 AGAACTCCGGAAGATGCTTTG-AGTTATAGTATCTATATGAACAATAAGTACGAACTAGA 183173
| || ||||| || || |||| || || | | ||| |||||||| | ||
Sbjct 12858 GCCTCACCAGAAGAAGCACTGGAGTT-TACAATATTGCTAAACGATAAGTACAGCTTGGA 12800
Query 183174 CGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAG 183233
|| ||||||||| || ||||| ||||| |||||||||||| | || | || ||
Sbjct 12799 TGGGCGGGATCCTAATGGCTACGTGGGTTGCATGTGGTCTATTGGTGGGGTGCATGACCA 12740
Query 183234 AGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAA 183293
|| ||||| ||| || |||| |||||||||||| | |||||||| ||| || | | ||
Sbjct 12739 AGGCTGGAAGGAACGATCTATCTTTGGAAAGATACGCTATATGAACTATCAGGGGTGCAA 12680
Query 183294 GAAGAAATTTGATGT 183308
||||| |||||
Sbjct 12679 ACGCAAATTCGATGT 12665
Score = 91.5 bits (100), Expect = 3e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 183154 AACAATAAGTACGAACTAGACGGTACGGATCCTAACGGATACGTAGGTTGTATGTGGTCT 183213
||| |||||||| | || || ||||||||| || ||||| ||||| |||||||||
Sbjct 12621 AACGATAAGTACAGCTTGGATGGGCGGGATCCTAATGGCTACGTGGGTTGCATGTGGTCT 12562
Query 183214 ATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAAGATAAGATAT 183273
||| | || | || || || ||||| ||| || |||| |||||||||||| | |||
Sbjct 12561 ATTGGTGGGGTGCATGACCAAGGCTGGAAGGAACGATCTATCTTTGGAAAGATACGCTAT 12502
Query 183274 ATGAATTATGAGAGTTCTAAGAAGAAATTTGATGT 183308
||||| ||| || | | || ||||| |||||
Sbjct 12501 ATGAACTATCAGGGGTGCAAACGCAAATTCGATGT 12467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903024991712000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |