Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq30232 131 2e-25
seq23742 89.7 5e-13
>seq30232
Length=15380
Score = 131 bits (144), Expect = 2e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||| ||||| || ||||| ||| || ||| |||||| |||||||||||
Sbjct 14906 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCCTCCAGCTGCTTGCCA 14965
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| | || | |||||||| || || || |||||||||||||| |||||| |||
Sbjct 14966 GCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTA 15025
Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643
| | ||||| || || | ||||||||| |||| |||| ||| ||||| |||| ||
Sbjct 15026 ACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTC 15085
Query 133644 TTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 15086 TTGACGAAGATCTGCAT 15102
Score = 129 bits (142), Expect = 6e-25
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514
||||| | |||||||| ||||| || ||||| ||| || ||| |||||| |||
Sbjct 15125 AAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGC 15184
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|||||||| ||| | || | |||||||| || || || |||||||||||||| |||
Sbjct 15185 TGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGAATC 15244
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | ||||| || || | ||||||||| |||| |||| ||| |||||
Sbjct 15245 TTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCA 15304
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| || || ||||| ||||||||
Sbjct 15305 GTCAAGGTCTTCACGAAGATCTGCAT 15330
>seq23742
Length=9256
Score = 89.7 bits (98), Expect = 5e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 116467 GGCCTGCACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCC 116526
|| |||||||||||||| |||||||||||||| || | | ||||||||||| |||||
Sbjct 3461 GGTCTGCACGGCTTCCATGTGCACGAGTTTGGAGATAATACCAACGGCTGCATGTCCGCT 3402
Query 116527 GGCGAACACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCAC 116586
|| || ||||| ||| | | |||| |||||| || || || || |||
Sbjct 3401 GGACCTCATTTCAATCCCCACAACAAGGAGCACGGCAGCCCTTGCGACGAGAACCGCCAC 3342
Query 116587 GTCGGTGACCTGGGCAACATTGAGGCC 116613
| |||||| ||||||||||||| |||
Sbjct 3341 CTGGGTGACTTGGGCAACATTGAAGCC 3315
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483214137608000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |