Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq30232 120 2e-22
seq20705 102 5e-17
>seq30232
Length=15380
Score = 120 bits (132), Expect = 2e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | ||||||||| | |||| ||| || || |||||||| |||||
Sbjct 15103 ACCACCACGGAGACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGA 15162
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| |||||| |||| |||| || || || || || |||||||||||||||||| | ||
Sbjct 15163 CAGAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGG 15222
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||| ||||| ||| || | | ||||| || | ||| || | ||||
Sbjct 15223 AATGCCTTCCTTGTCTTGAATCTT-GGCCTTAACATTCTCAATGGTATCTGAGGGCTCCA 15281
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || || || || || ||||||||||||
Sbjct 15282 CTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATA 15331
Score = 109 bits (120), Expect = 4e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | |||||| | |||||| || | ||| ||| || || |||||||| |||||
Sbjct 14876 CCACCGCGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAC 14935
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
| |||||| |||| |||| || || || || || |||||||||||||||||| | ||
Sbjct 14936 AAAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 14995
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||| ||||| || || | | ||||| || | ||| || | |||||
Sbjct 14996 ATGCCTTCCTTGTCTTGGATCTT-GGCCTTAACATTCTCAATGGTATCTGAGGGCTCCAC 15054
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || || || || || || || || ||||||||||||
Sbjct 15055 TTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCATA 15103
>seq20705
Length=54059
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||| | | || | |||||| || | || ||||||||| |||||||| ||||
Sbjct 6858 CACCACCACGGAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGG 6917
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| || ||||| | || ||||||||||| || ||||| |||| ||| || |||||| | |
Sbjct 6918 ACAGAGTGCGACCATCTTCCAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAG 6977
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | || |||||||| ||| || | || |||| || | || || | |||
Sbjct 6978 GAATTCCCTCTTTGTCCTGAATCTT-GGCTTTGACATTTTCGATTGTATCCGAAGGTTCG 7036
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| |||| ||||| || || || |||| || || || || ||||||||
Sbjct 7037 ACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTAACGAAAATCTGCAT 7086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328566992064000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |