Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq20705 93.3 1e-13 >seq20705 Length=54059 Score = 93.3 bits (102), Expect = 1e-13 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| | || || ||| ||| || ||| ||||| Sbjct 7071 AAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTCGGATACAATCGAAAAT 7012 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || |||||| || ||||| |||||| || || ||| | || ||||| Sbjct 7011 GTCAAAGCCAA-GATTCAGGACAAAGAGGGAATTCCTCCAGATCAACAACGTCTGATCTT 6953 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| | ||| || |||| |||||| | || |||||||| Sbjct 6952 TGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAACATTCAAAAAGAGTC 6893 Query 206364 TAC 206366 ||| Sbjct 6892 TAC 6890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181302940898200