Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 163 3e-35
seq30232 89.7 5e-13
>seq20705
Length=54059
Score = 163 bits (180), Expect = 3e-35
Identities = 919/1452 (63%), Gaps = 52/1452 (4%)
Strand=Plus/Plus
Query 146549 CAACAGTGAATTGTTGTGTGTGCGCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTT 146608
||||||| || || | || || ||||||||||| ||||| |||||||| || ||||
Sbjct 37342 CAACAGTAAACTGAATAGCGTTTGCAGCAGGTTTTGTTCGCAAGTAATACATTCCTGTTT 37401
Query 146609 TGAGGCCACATCGCCACGAGTGATTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCG 146668
| || ||| ||| |||| | || |||||||||| | | || | ||||| |
Sbjct 37402 TAAGCCCAGCCTTCCATGAGTAAAAATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTG 37461
Query 146669 CCACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCT 146728
||||| || |||||| || || ||||||||||| ||||| | || || ||||| |
Sbjct 37462 CCACGTGAATATTAAAGGACTGACTTTGATCTATAAAAGCACCCCTATCAGCAGCCATTT 37521
Query 146729 CAATCATGCGTTTTGTCTTCATTTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTG 146788
|| | ||| |||||||| |||| ||||||| | ||| | |
Sbjct 37522 TTATTGTTGATTTAACGGAGATTTCCCATACGGTCTTGTACAAGTCTCGGACGTGTTGAG 37581
Query 146789 GAATACCTTCAATGTTTTGAATAGAGCC----CTTGTGCGCAAAAATAGTGTTTCGTATT 146844
||||| ||||||||||||||||| || |||| ||| | ||| || |
Sbjct 37582 GAATAGAATCAATGTTTTGAATAGAACCACGGCTTG---------ATATTATTTGGTTCT 37632
Query 146845 TC-GGGCGT----GTAAAGGTTTAGTTTAATGAGGTCATCAATTAAATACTGATTGACCA 146899
|| | ||| | |||| | || | | || | || | ||||| || |
Sbjct 37633 TCATGTCGTCATCCCATAGGTCCAATTCTGTCAAATCTCGTAGTAGGTGATGATTTACTA 37692
Query 146900 CTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAG 146959
|||| || || || | | ||| |||||| || | ||| ||| | ||||| || |
Sbjct 37693 CTTGGAATTCACCAGATAACACCCGTCTGGTGTAAATATTAGATGTGTACGGCTCGAAGG 37752
Query 146960 ACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATG 147019
| |||||||| || | ||||||||| |||| ||| |||||||| || | | ||| |
Sbjct 37753 ATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGCATTGGTGCAATAAGCAAAG 37812
Query 147020 AATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAA--GTTTGCCAGTCCCACATCGA 147077
|||| || | |||| | ||| | || || || | ||||||||| |
Sbjct 37813 AATTGCGAACGCCGT--GTTTCTTAATTGACGTTTTAAGTGTATTCCAGTCCCATAAATC 37870
Query 147078 CGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGC 147137
| || || ||||||||||| ||||| | | ||| ||| | || ||||| |
Sbjct 37871 TGTTGGAGTTTTATTCCACATGTCATACTGTAAAATACCTTTACTCACTGGGCTGCCTTC 37930
Query 147138 GAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATA 147197
| || |||| || | || || | || || |||||||||||||||||| |
Sbjct 37931 ATATGTTTCGTAGTAGCCATGTTCTTGTGCGAGCTCGCAACTTGCCTCGAGCGCTCCAAA 37990
Query 147198 GTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGTAAGGCAT 147257
||||| || ||| || || | |||||| | | || || ||||| |||||||| ||
Sbjct 37991 ATATATTGTCTCGAAAATCTGCTGGTTTAGAAGAGATGCCTCATCGCTTTCGTAAGG-AT 38049
Query 147258 A-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCT 147316
| |||| | | | |||||||| || ||||| | ||| | || ||||| || |||
Sbjct 38050 ACCGCATTAAGATCAGTGCATCGGCAAAGCCCTGAACACCAATTCCAATAGGACGGTGCC 38109
Query 147317 TTTCGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAATCTTGTTG 147375
|| ||| || || ||| | || ||||| |||| |||||| || |||||
Sbjct 38110 TTAAGTTCGATTTTTTAGC-CTCTGGTAGAGGATAAAAGTTGATATCAATTATTTTGTTC 38168
Query 147376 AGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCT 147435
| ||| |||| || |||| ||| | ||| | || || || | | |
Sbjct 38169 AAGTTTTTTGTAACAATCTTTGTTACATCTTTCAATTTTTTAAAGTCGTATTT---TTTT 38225
Query 147436 TCGACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCG 147495
||| | || | || | ||| || || || | ||||| || || | || ||
Sbjct 38226 TCGGGAGTGACAAACATATTGAGGGCTATGGAAGCTAAGTTGCAAACAGCAATTTCATCA 38285
Query 147496 GCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTT 147555
| | || |||| ||| ||||||| || | ||||||||||| ||| ||| | |||
Sbjct 38286 GGGGCGGAATACTCCACAATTTCGGTACATAAATTGCTGCATTTAATGGTTCCAACGTTT 38345
Query 147556 TGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCG 147615
|| ||||| ||||| ||||| || | |||||||| ||||| || || || || ||
Sbjct 38346 TGTTGATTACTTTTGCGATTACAGGAATCTTTGAACAGCATATATGGAGTACCAGTTTCT 38405
Query 147616 ACTTGCGTTTCAACGATA--AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGA-TAG 147672
||||| | |||| ||| || | | ||| |||||| | | | ||| |||
Sbjct 38406 ACTTGAGACTCAATTATAGCAAACCA--CAGAGATTGCGCT-TTAATTGTT--CGATTAG 38460
Query 147673 --CGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGG 147730
||||| || | ||| || | || | |||||||| || || | |||
Sbjct 38461 CACGGCCTTCCTGTTCATATTTGACATAGAGTTTATCAAACTCTTCTCCCCAAACATCAT 38520
Query 147731 CAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTC 147790
| ||| ||||| | ||| || ||||||| ||||| || | || | ||| ||
Sbjct 38521 GTAAGCCAGGACATTTATGTGGGCACATCAATGACCAATCCTCATTAGCTTCAACACGCT 38580
Query 147791 GCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC----GCGCGCTTTGCAATCC 147846
|||||| ||||| || | ||| | || || | |||||| || || ||| |||
Sbjct 38581 TCATAAAAAGATCTGGTATCCATAAAGCATAGAAAAGATCTCGGGCACGATTT----TCC 38636
Query 147847 TCGGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTC 147905
|| ||| |||| ||| || | ||| | | | | | ||| | ||||| |||||
Sbjct 38637 TCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTC-AAACACGTCTGAATGCCAAGGTTC 38695
Query 147906 AATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGGCGCACCAT 147962
| || | || | ||||| ||||||| || |||||||| |||| ||| |||
Sbjct 38696 TAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCTCCCTGGTCAACATAGCGAGCCAC 38755
Query 147963 GTTGTTAAACAC 147974
||||||||| ||
Sbjct 38756 GTTGTTAAAAAC 38767
Score = 104 bits (114), Expect = 2e-17
Identities = 156/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||| | ||| | ||||| || | | |||||||||||||||||||||||| || ||
Sbjct 6865 ACGGAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGT 6924
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| |||||| | ||||| || | | |||| ||||| |||||||||||||| || ||
Sbjct 6925 GCGACCATCTTCCAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCC 6984
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
||||| || ||| || ||| | | ||| | ||||| | || || || || |
Sbjct 6985 CTCTTTGTCCTGAATCTTGGCTTTGACATTTTCGATTGTATCCGAAGGTTCGACCTCAAG 7044
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || || || || || | ||||||||||||
Sbjct 7045 GGTGATGGTCTTGCCCGTTAGGGTCTTAACGAAAATCTGCAT 7086
>seq30232
Length=15380
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||||||| | | ||||| || || |||||||||||| || || || || ||
Sbjct 15122 ACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCC 15181
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
||||| || || | |||| | |||||| |||||||| || |||||||| || || |
Sbjct 15182 AGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGA 15241
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|| || || | | || | ||||| | ||||||||||||| || | || ||
Sbjct 15242 ATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTG 15301
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||| || || | ||| ||||||||
Sbjct 15302 CCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
||||| || | ||||| || | | ||||| || || |||||||||||| || ||
Sbjct 14882 CGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTG 14941
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| || || ||||| || || | |||| | |||||| |||||||| || ||||||
Sbjct 14942 CGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCT 15001
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| || || || || || | | || | ||||| | |||||||||||||
Sbjct 15002 TCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGA 15061
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || ||||||| || || | ||| ||||||||
Sbjct 15062 GTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476407448712000
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