Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 93.3 4e-14
>seq20705
Length=54059
Score = 93.3 bits (102), Expect = 4e-14
Identities = 167/237 (70%), Gaps = 13/237 (5%)
Strand=Plus/Plus
Query 136972 AGATGCTGATTTACTACTTGATATTCGCCCGATAGCAC---TCTGCGTACGTACAGATTA 137028
|| || |||||||||||||| |||| || |||| ||| |||| || ||| | ||||
Sbjct 37677 AGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTG-GT--GTAAATATTA 37733
Query 137029 CTAGTGAACGGCTCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGC 137088
||| |||||||||| ||||| || ||||||| || || ||||| | ||||| |||
Sbjct 37734 GATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGC 37793
Query 137089 ATGTAAGCGATCAACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCT 137148
|| || || | ||| ||||| || | |||||| ||||| | || | | |
Sbjct 37794 ATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGTTTTAAGTGT 37852
Query 137149 -TTCCAGTTCCACAGAT-TGTTCGATTGGGTTATATTCCACAAATCAAACTGCAAAA 137203
||||||| ||| | || |||| || ||| ||||||||| ||| |||| ||||
Sbjct 37853 ATTCCAGTCCCATAAATCTGTTGGA----GTTTTATTCCACATGTCATACTGTAAAA 37905
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444904122144000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |