Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq20705 93.3 4e-14 >seq20705 Length=54059 Score = 93.3 bits (102), Expect = 4e-14 Identities = 167/237 (70%), Gaps = 13/237 (5%) Strand=Plus/Plus Query 136972 AGATGCTGATTTACTACTTGATATTCGCCCGATAGCAC---TCTGCGTACGTACAGATTA 137028 || || |||||||||||||| |||| || |||| ||| |||| || ||| | |||| Sbjct 37677 AGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTG-GT--GTAAATATTA 37733 Query 137029 CTAGTGAACGGCTCGAACGATTCGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGC 137088 ||| |||||||||| ||||| || ||||||| || || ||||| | ||||| ||| Sbjct 37734 GATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGATGCTGTAGGC 37793 Query 137089 ATGTAAGCGATCAACAATGAATTCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCT 137148 || || || | ||| ||||| || | |||||| ||||| | || | | | Sbjct 37794 ATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGTTTTAAGTGT 37852 Query 137149 -TTCCAGTTCCACAGAT-TGTTCGATTGGGTTATATTCCACAAATCAAACTGCAAAA 137203 ||||||| ||| | || |||| || ||| ||||||||| ||| |||| |||| Sbjct 37853 ATTCCAGTCCCATAAATCTGTTGGA----GTTTTATTCCACATGTCATACTGTAAAA 37905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444904122144000