Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq639 122 1e-22 >seq639 Length=19670 Score = 122 bits (134), Expect = 1e-22 Identities = 303/451 (67%), Gaps = 13/451 (3%) Strand=Plus/Minus Query 178885 CCCGTGCCGATGCCTTCGGTTCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGAAG 178944 || ||||| ||||| |||| || ||||| || ||||| || | ||||| ||||| | Sbjct 1271 CCTGTGCCAATGCCCTCGGCGCCATTCACCAGCACCATGGGTATAGTTGGTATATACCAC 1212 Query 178945 TCTGGTTCAATCGCACGCCCGTCATCATCCAAATAATTGAGCACGGGGTCGTCCCTCGGA 179004 ||| |||||| | || ||||| | || | ||||| |||||| ||| ||| Sbjct 1211 AATGGCTCAATCCTCTGTCCATCATCCACTTGGTACTGGAGCAAGGGGTCATCCAGTGGA 1152 Query 179005 TCAAAGATTTTACGAGCATCCCTGGTGAGTTTTG--TGAAGATGTACCTCGT--TTGAGA 179060 | | | || || | | || || | | |||| ||||| | | ||| Sbjct 1151 TTATAAATGAGTCGCGTTAGC--GGCGACATCAGGGTGAAAATGTAACGAGCACTTG--- 1097 Query 179061 CGCA-TCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGA 179119 |||| ||||| || || || ||||| ||||| ||||| | ||||| || ||||||| Sbjct 1096 CGCAATCTTTACCGCCAGCAAGGCGCGTACCAAACTGACCGCGCGGCTCCAGAAGATTGA 1037 Query 179120 TATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGT-ATCCGCGAGGGAGACT 179178 ||||||| || |||| | | | | |||||| || |||||||| || | ||| ||||| Sbjct 1036 TATTGTTGGAGCCCACGAAATTTTGGGCCAAGTTTACAATCGTCATTTG-GAGAGAGACC 978 Query 179179 TCACCGTGATGGTAAGCCGACTTGTCCGCCACATATGCCGCCAACTGCGCCACCTTCATC 179238 |||||||||||||| |||||| | ||||| || | ||| || ||| ||||| || | Sbjct 977 TCACCGTGATGGTAGGCCGACATTTCCGCAACCGAACCCGACAGCTGAGCCACTTTTACT 918 Query 179239 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATCACCTTTCTTTGTGAAGGCTTGAGG 179298 ||| |||| ||| | |||||| | |||| ||||| | || ||||| || Sbjct 917 TCACGCTTGTCGTTACGCTTGAAGCAGGTGAACATGACCTTGCGCTGGCCGGGCTTTAGA 858 Query 179299 CCGTCGGCCATGTGCGCGATGGAACGCTTCA 179329 || || ||| | | |||||||| |||| Sbjct 857 CCATCCACCAGATTTGGTATGGAACG-TTCA 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618170818952000