Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq13173 82.4 8e-11 >seq13173 Length=15772 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 59980 AACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTA 60039 |||| | ||||||||||| ||| ||||| |||||||| |||| ||| | | | Sbjct 14291 AACGCATTATAGCTTTTGCCGCCGTCGAAGGCATCTTCTTTAGTGGCAGCTTCGCTTCAA 14350 Query 60040 TTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTT 60099 | || ||| | || ||||| || || ||||| || || | ||||| || ||| | |||| Sbjct 14351 TCTTTTGGTTGAAGAAGCGCGGTCTTATGCCCGGTCTTACCTTCTCAAATGAGTTAATTT 14410 Query 60100 CCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTG 60134 | || |||||||| || ||| || ||||| ||| Sbjct 14411 CACGCGACGAGGGTCTACATTGCGATTTTGCCGTG 14445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548290305648000