Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq10079 194 1e-44
seq30232 149 5e-31
seq20705 140 3e-28
>seq10079
Length=19992
Score = 194 bits (214), Expect = 1e-44
Identities = 217/288 (75%), Gaps = 4/288 (1%)
Strand=Plus/Minus
Query 135474 TGTGGAACGCGGCACAACGGCAGCT--TAAGCGAGAAGGCAAAATGCACGGATTTATGCG 135531
|||||||| | || || |||||| ||| || |||||||||||| |||||| ||||
Sbjct 12950 TGTGGAACTCTGCGCAGTTGCAGCTGGTAAAGGA--AGGCAAAATGCATGGATTTCTGCG 12893
Query 135532 CATGTATTGGGCAAAAAAGATATTGGAATGGTCTGCATCGCCTGCAGAGGCGCTACAACA 135591
||||||||||| |||||||| ||||||||| | || || || | ||| || || |
Sbjct 12892 AATGTATTGGGCCAAAAAGATTTTGGAATGGACCGCCTCACCAGAAGAAGCACTGGAGTT 12833
Query 135592 CGCAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGG 135651
||||||| | || ||| | ||||| || ||||| || ||| | ||||||||||| ||
Sbjct 12832 TACAATATTGCTAAACGATAAGTACAGCTTGGATGGGCGGGATCCTAATGGCTACGTGGG 12773
Query 135652 TTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGG 135711
||| |||||||||||| | || || || || ||||| |||||||| || | |||||
Sbjct 12772 TTGCATGTGGTCTATTGGTGGGGTGCATGACCAAGGCTGGAAGGAACGATCTATCTTTGG 12713
Query 135712 CAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGT 135759
||||| ||||||||||||||| | || || | | | ||||| ||||
Sbjct 12712 AAAGATACGCTATATGAACTATCAGGGGTGCAAACGCAAATTCGATGT 12665
Score = 127 bits (140), Expect = 2e-24
Identities = 136/180 (76%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 135594 CAATATTTTTTAATGATTACTACAGTTTAGATGGACGCGATTCAAATGGCTACGTAGGTT 135653
||||||| | || ||| | ||||| || ||||| || ||| | ||||||||||| ||||
Sbjct 12632 CAATATTGCTAAACGATAAGTACAGCTTGGATGGGCGGGATCCTAATGGCTACGTGGGTT 12573
Query 135654 GTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGTTTGGCA 135713
| |||||||||||| | || || || || ||||| |||||||| || | ||||| |
Sbjct 12572 GCATGTGGTCTATTGGTGGGGTGCATGACCAAGGCTGGAAGGAACGATCTATCTTTGGAA 12513
Query 135714 AGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAATTTGTACGTGA 135773
|||| ||||||||||||||| | || || | | | ||||| |||| | | ||| ||||
Sbjct 12512 AGATACGCTATATGAACTATCAGGGGTGCAAACGCAAATTCGATGTGACTGCGTATGTGA 12453
>seq30232
Length=15380
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || |||| |||||| | || ||||| |||||||| || ||
Sbjct 15330 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTCGAAGTGGAGCCCTCA 15271
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||||| || || || ||||||||||| |||||||| || || |||||
Sbjct 15270 GATACCATTGAGAATGTTAAGGCCAAGATTCAAGACAAGGAAGGCATTCCCCCAGATCAG 15211
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||||| || | ||| ||||| || |||| ||| | || | ||||| ||||||
Sbjct 15210 CAGCGTTTGATCTTCGCTGGCAAGCAGCTGGAGGACGGACGCACTCTGTCCGACTACAAC 15151
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || || |||||||| | ||| | || ||||| ||
Sbjct 15150 ATCCAGAAGGAGTCCACTTTGCATTTGGTGCTCCGTCTCCGTGGTGGTAT 15101
>seq20705
Length=54059
Score = 140 bits (154), Expect = 3e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || || || || |||||| | || || ||||| || ||||| ||
Sbjct 7086 ATGCAGATTTTCGTTAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAACCTTCG 7027
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | |||||| || ||||| |||||||| || || || || ||||||
Sbjct 7026 GATACAATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCAGATCAA 6967
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| ||| | || | || ||||||||||||||||| || || | ||||| ||||||
Sbjct 6966 CAACGTCTGATCTTTGCTGGCAAACAATTGGAAGATGGTCGCACTCTGTCCGACTACAAC 6907
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
|||||||| ||||| || || || ||||| | || | || |||||
Sbjct 6906 ATTCAAAAAGAGTCTACATTGCACTTGGTGCTCCGCCTCCGTGGTGG 6860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434732472384000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |