Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_028995.1
Length=43216
Score E
Sequences producing significant alignments: (Bits) Value
seq20195 147 6e-31
>seq20195
Length=46786
Score = 147 bits (162), Expect = 6e-31
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 9032 GATATGAAGTTAACTGAATTTTTAGAAAAAATTGGAAATGAAAACTTGAAAATTCAAGTT 9091
|| |||| ||||| |||||||||| |||||| || ||||| || | ||||| ||
Sbjct 26013 GAGATGACATTAACGGAATTTTTAGGAAAAATAGGCAATGAGAATCTAGCTATTCAGATT 26072
Query 9092 TTGCACAATTCAATTGTTTCCGAGAGaaaaacaaaaaaCGATATAGAAATTACATTTGCA 9151
|| || | || || | ||||||| |||||| ||| | ||||| ||| | || ||||||
Sbjct 26073 TTACATGACTCTGTTATCTCCGAGAAAAAAACCAAAGAAGATATTGAAGTGACTTTTGCA 26132
Query 9152 ACAGAAAATGGTAATTCTCAAATTTTAAGTAAAAGTAATCGTGTTGGTATTGTGGTTTGG 9211
|||||| || ||||| | || | ||| || || ||||| ||||||||||||
Sbjct 26133 ACAGAATCCAAAAACACTCAACTATTGGGAAAATCAAAACGAGTTGGCATTGTGGTTTGG 26192
Query 9212 ATGGATGCTGAGAAATACAATGAGGCTATAAAATGA 9247
||||||||||| || ||||| |||||||||||||||
Sbjct 26193 ATGGATGCTGATAAGTACAACGAGGCTATAAAATGA 26228
Score = 102 bits (112), Expect = 2e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 37759 ATGAAAATGACAAAAGGTGGCTTTGATATATTACGCAAAGCCTTTGGCTCACTTACTCAG 37818
||||| |||||| |||||| ||| ||||| | || || || || | | | ||
Sbjct 941 ATGAAGATGACAGCAGGTGGATTTAATATACTGCGTAATAATTTAGGTCGATTAAACCAA 1000
Query 37819 ACACAAGTGAACGCTATTAATTTCTTAATTGATGAGTTTGACAAAGACAAATCAATCAGC 37878
| ||||| | |||||||| ||| | |||||| || ||||| ||||| ||
Sbjct 1001 AGCCAAGTTGATCAGATTAATTTTTTAGTATCTGAGTTCGATAAAGATAAATCCATTTCA 1060
Query 37879 TACCCACAAGCATCCTACATGCTTGCTACTACATGGCACGAAACAGCGCGCACGATGCTA 37938
|| ||||||||| |||||||||||||||| |||||||| ||||| ||| || |||||
Sbjct 1061 TATCCACAAGCAGCCTACATGCTTGCTACCACATGGCATGAAACTGCGACAACCATGCTG 1120
Query 37939 CCTATCAAGGA 37949
||||| ||||
Sbjct 1121 CCTATTGAGGA 1131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138113485871200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |