Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 150 4e-31
seq30232 132 1e-25
>seq20705
Length=54059
Score = 150 bits (166), Expect = 4e-31
Identities = 152/198 (77%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|| ||||||||||| ||||| || || | || || | |||||||||| || |||||
Sbjct 6890 GTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTCCAATTGTTTGCCA 6949
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|| ||||| || |||||||| || ||||||| ||| || |||||||| ||||| |||
Sbjct 6950 GCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTG 7009
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| |||||||| || || || ||| ||||| || ||||| ||||| ||||| || |||
Sbjct 7010 ACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 7069
Query 211098 TTTACAAACACCTGCATT 211115
|| || || | |||||||
Sbjct 7070 TTAACGAAAATCTGCATT 7087
>seq30232
Length=15380
Score = 132 bits (146), Expect = 1e-25
Identities = 148/198 (75%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||||||||| || |||||||| || || | || || | ||| || ||||||||||||||
Sbjct 15133 AGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGTCCGTCCTCCAGCTGCTTGCC 15192
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|||||||| | || || || || || |||| ||||||||||| || ||||| ||
Sbjct 15193 AGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGAATCTTGGCCTT 15252
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|| || || ||||| || ||| || || ||||||||||| ||||| || || | ||
Sbjct 15253 AACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCAGTCAAGGT 15312
Query 211097 CTTTACAAACACCTGCAT 211114
||| || || | ||||||
Sbjct 15313 CTTCACGAAGATCTGCAT 15330
Score = 131 bits (144), Expect = 4e-25
Identities = 147/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977
|||||||| || |||||||| || || | | || | ||| || ||||||||||||||
Sbjct 14906 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCCTCCAGCTGCTTGCCA 14965
Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037
|||||||| | || || || || || |||| ||||||||||| |||||||| ||
Sbjct 14966 GCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTA 15025
Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097
|| || || ||||| || ||| || || ||||||||||| ||||| || || | |||
Sbjct 15026 ACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTC 15085
Query 211098 TTTACAAACACCTGCAT 211114
|| || || | ||||||
Sbjct 15086 TTGACGAAGATCTGCAT 15102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158644074083000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |