Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 91.5 1e-13
>seq20705
Length=54059
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/219 (69%), Gaps = 12/219 (5%)
Strand=Plus/Plus
Query 101029 CACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTC 101088
||||| |||||| || || ||||||||||| ||||| |||| || ||| ||||||
Sbjct 6877 CACCAAGTGCAATGTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTC 6936
Query 101089 CAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGC 101148
|||||||||||| ||| | || || | |||||| ||| || | || ||||||||
Sbjct 6937 CAATTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTG 6996
Query 101149 AATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGAC------GGTAAT 101202
||| || ||| |||| | | || || || | |||||| ||| ||
Sbjct 6997 AATCTTGGCTTTGACATTTTCGATTGTATC------CGAAGGTTCGACCTCAAGGGTGAT 7050
Query 101203 AGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATTAT 101241
|| |||||||| | || |||| ||||| ||||||||
Sbjct 7051 GGTCTTGCCCGTTAGGGTCTTAACGAAAATCTGCATTAT 7089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409490048257800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |