Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq13173 140 3e-28
>seq13173
Length=15772
Score = 140 bits (154), Expect = 3e-28
Identities = 472/721 (65%), Gaps = 18/721 (2%)
Strand=Plus/Minus
Query 4369 CTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTC 4428
|||| |||| || || || |||||||| || || | ||| |||| ||| || || |
Sbjct 14623 CTACCAGCAGACGATCGGCGACAAATTCAATGTATTCAGACATCAGTTTGCAATTCATGC 14564
Query 4429 CAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTG 4488
||||||| | || || | |||| ||| | ||||| ||||| || ||| || ||||
Sbjct 14563 CAATTAAGTTTACGGGCAAAGCGTCTGTGAGGAACTCCTGTTCGATGACTACAGCATCTG 14504
Query 4489 TGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCA--AACAATAA 4546
|| || || | || || | ||| || | || || | |||| | |
Sbjct 14503 AAATGATTTCAATAATGCGTTCACGAC-TGGGACGTTGAACCAG-ATGCTGGAACA-TCA 14447
Query 4547 ACACG-CAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTA 4605
|||| ||||||| ||||| | ||| ||||| | ||| | || || || || || |
Sbjct 14446 GCACGGCAAAATCGCAATGTAGACCCTCGTCGCGTGAAATTAACTCATTTGAGAAGGTAA 14387
Query 4606 ATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGA 4665
|||||||| | ||| | ||| || | |||||| || | || || ||| |||||
Sbjct 14386 GACCGGGCATAAGACCGCGCTTCTTCAACCAAAAGATTGAAGCGAAGCTGCCACTAAAGA 14327
Query 4666 ATATGCCTTCTACGGCGGCAAACGCTACTAATCGGG--ACCCGAACGAGCTGGCTTTGTC 4723
| |||||||| ||||||||||| |||| |||| | ||| || |||| |||||
Sbjct 14326 AGATGCCTTCGACGGCGGCAAAAGCTA-TAATGCGTTCACCAAAATTGGCTGACTTTGAA 14268
Query 4724 TTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGC 4783
|||||| | ||||||| || || ||| || || || || | || ||
Sbjct 14267 GA-AATCCAAGCGAGGGCCCAGTCCGCCTTGCGCTTTACTGCTGGCATAGTCTCAATCGC 14209
Query 4784 GTTAAATAATTTACTTTT-TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842
|| || || || | || | || || | ||||| ||||| || |||| ||| |
Sbjct 14208 ATTGAA-AAGATAGTCGCGTTGATGAGGATCACGTATATAGGTGTCGATAAGTACGCTGT 14150
Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902
||||||| ||||| | || || || ||||| || || || ||||| || | || || |
Sbjct 14149 ACATTTCCGAATGCACGTTCTCCATGGCAATTTGGAAGCCATAAAAACAACGTGCCTCGG 14090
Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
||| || || || | | ||| | |||||| | |||||||| || || || || |
Sbjct 14089 TTATCTGCACCTCCTGGCTAAAGCGTTCTACCAGATTTTCGTTGACAATGCCATCTGATG 14030
Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGT---ACTGTTCGTCAGGCTTAAGTTTTT 5019
| || || || ||||| |||||||||||||||| || | ||||| | || |
Sbjct 14029 CGGCGAAGAATGCCAACACATGAGATATAAAGTGACGCTCATTGTCAG---TCAGGCGAT 13973
Query 5020 TCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCG 5079
|||| | | || || || | | ||| || ||||| || ||||| || || ||||| |
Sbjct 13972 TCCAATCTGTCATGTCCTTGGACAGATCCACCTCTTCGACCGTCCAGAAAGATGCTTCGG 13913
Query 5080 C 5080
|
Sbjct 13912 C 13912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426871600388600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |