Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201 5-05-28] 34,200 sequences; 187,416,727 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq20705 544 1e-149 >seq20705 Length=54059 Score = 544 bits (602), Expect = 1e-149 Identities = 1240/1848 (67%), Gaps = 22/1848 (1%) Strand=Plus/Plus Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACT-CCATCCGTAGAA 75456 || |||||||| || | || ||||| || ||||| || ||||| || |||| ||| || Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAG-CCCAGCCTTCCATGAGTAAAA 37426 Query 75457 ATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACT 75516 ||| || || ||||| ||| | || || || | |||||||| | |||||||| Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486 Query 75517 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA-GGA-ATT 75574 |||||| || ||||| || |||||||| ||||||||||| || | ||| | ||| ||| Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTAT--TGTTGATTTAACGGAGATT 37544 Query 75575 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA---TTTGTATTTTGAATG 75631 ||||| | || ||| | | | | || | | |||| | | | |||||||| Sbjct 37545 TCCCATACGGTCTTGTACAAGTCTCGGACGTGTTGAGGAATAGAATCAATGTTTTGAATA 37604 Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTT 75691 || || | ||||| ||| ||||| || || |||| ||| | | || || Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664 Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751 ||| ||| || || ||| |||| || | ||| ||||| ||||| || || | || ||| Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724 Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811 ||||||||| || || || || | |||||||| || |||| ||||| ||||| || Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784 Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871 || || ||||| ||||| | | ||| ||| | | || ||| |||| | || | | Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGT 37843 Query 75872 TTTAGATAT-TTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAG 75930 |||| | | ||||| ||||| | ||||| ||| || ||| | || || |||| Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903 Query 75931 AATTCCGTTGCTAGCATATGATCCATT-ATATGTTTCGTA--AGTCCCGTCCTTTTCAGC 75987 ||| || || || | | | | | || |||||||||||| || | || ||| | || Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGT--GC 37960 Query 75988 TAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAG 76047 || |||||||| ||||| | ||| || |||| ||||| |||||||||| || || || Sbjct 37961 GAGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAG 38020 Query 76048 ATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCC 76107 | || ||| || || ||||||| | | | || | |||||| || | || Sbjct 38021 AAGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGATCAGTGCATCGGCAAAGCC 38080 Query 76108 CTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGG 76167 |||||| ||||| |||||||| | || || || || ||| ||| ||||| | ||| Sbjct 38081 CTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAGG 38140 Query 76168 GTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTT 76227 ||| | || ||||| || ||||| || | ||| | ||| | || || || || Sbjct 38141 ATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAATCTTTGTTACATCTTT 38200 Query 76228 TAGTTTGAGAAAATCAAATTTTCCATC---TATCACAAACATATTAAGAGCTATAGATGC 76284 | ||| ||| || ||||| || | ||||||||||| || ||||| || || Sbjct 38201 CAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTATGGAAGC 38260 Query 76285 TAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATT 76344 || || ||||| || | |||| || || ||| | | || || || |||| ||| Sbjct 38261 TAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATT 38320 Query 76345 ACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATA 76404 || || || || ||||||| |||||||| || || || ||||| || || || | Sbjct 38321 GCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAA 38380 Query 76405 AAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT 76464 || | | | ||||| |||||||| | || || || || |||| ||| | | Sbjct 38381 CAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAGAGATTG 38440 Query 76465 AGCTTTTATT-ATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAA 76523 ||||| ||| | |||| | | || | || |||||||| ||| | |||| Sbjct 38441 CGCTTTAATTGTTCGATTAGCACGGCCT-TCCTGTTCATATTTGACATAGAGTTTATCAA 38499 Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583 | || |||||||||||||||| || |||||||||| || || |||||||||||||| | Sbjct 38500 ACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATGACCAAT 38559 Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643 | ||| | | ||| || |||||||| ||||| |||||||||| |||| || |||| Sbjct 38560 CCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGCATAGAAAAGAT 38619 Query 76644 CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703 |||||| | | ||| || || || || || ||||| | |||| || || | | | Sbjct 38620 CTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCAAACACGT 38679 Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763 | |||||||| ||||||| ||| || || | |||| || || || ||||||||| | Sbjct 38680 CTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCTCCCTGGT 38739 Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTAC 76823 | | ||| | || ||| ||| ||||||| | |||||| | | || || || || | Sbjct 38740 CAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTTGAAGTTC 38799 Query 76824 CATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTC 76883 |||| |||||| | || || | || |||||||| || || || |||| Sbjct 38800 CATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATCCCGATTC 38859 Query 76884 CTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATAC 76943 | || || ||| || || | || || ||| | | | | | || || || || Sbjct 38860 CACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCTTCAATTG 38919 Query 76944 TATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 77003 |||| ||| ||| ||||||||||||| |||| ||| | || || |||| Sbjct 38920 AATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTAGCTGCCG 38979 Query 77004 TAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 77063 || | ||| || || ||||| ||||| || || ||||| | ||||| ||||||| Sbjct 38980 CGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTACGTTTCAA 39039 Query 77064 TAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123 | || || ||||| ||| ||||| | || |||||||| ||||||||||| | Sbjct 39040 CTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATATGCTGTG 39099 Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183 | ||||| || | || |||||| ||||| || ||||| ||| | |||||||| | Sbjct 39100 GGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTTTTAAATC 39159 Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231 |||||||||||||| |||||| | || ||||| ||| | || |||| Sbjct 39160 CAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTTTA 39207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712629620544000