Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq20705 544 1e-149
>seq20705
Length=54059
Score = 544 bits (602), Expect = 1e-149
Identities = 1240/1848 (67%), Gaps = 22/1848 (1%)
Strand=Plus/Plus
Query 75398 GCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGACCCAGACT-CCATCCGTAGAA 75456
|| |||||||| || | || ||||| || ||||| || ||||| || |||| ||| ||
Sbjct 37368 GCAGGTTTTGTTCGCAAGTAATACATTCCTGTTTTAAG-CCCAGCCTTCCATGAGTAAAA 37426
Query 75457 ATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACT 75516
||| || || ||||| ||| | || || || | |||||||| | ||||||||
Sbjct 37427 ATGTATCGAAGTCAGTTTTCCATAGTTGGGCTCTGCCACGTGAATATTAAAGGACTGACT 37486
Query 75517 TTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGA-GGA-ATT 75574
|||||| || ||||| || |||||||| ||||||||||| || | ||| | ||| |||
Sbjct 37487 TTGATCTATAAAAGCACCCCTATCAGCAGCCATTTTTAT--TGTTGATTTAACGGAGATT 37544
Query 75575 TCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA---TTTGTATTTTGAATG 75631
||||| | || ||| | | | | || | | |||| | | | ||||||||
Sbjct 37545 TCCCATACGGTCTTGTACAAGTCTCGGACGTGTTGAGGAATAGAATCAATGTTTTGAATA 37604
Query 75632 GATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTT 75691
|| || | ||||| ||| ||||| || || |||| ||| | | || ||
Sbjct 37605 GAACCACGGCTTGATATTATTTGGTTCTTCATGTCGTCATCCCATAGGTCCAATTCTGTC 37664
Query 75692 AAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTG 75751
||| ||| || || ||| |||| || | ||| ||||| ||||| || || | || |||
Sbjct 37665 AAATCTCGTAGTAGGTGATGATTTACTACTTGGAATTCACCAGATAACACCCGTCTGGTG 37724
Query 75752 TAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAA 75811
||||||||| || || || || | |||||||| || |||| ||||| ||||| ||
Sbjct 37725 TAAATATTAGATGTGTACGGCTCGAAGGATTCATTATTACCCATTATTTGGGCAGTGGAT 37784
Query 75812 GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCT 75871
|| || ||||| ||||| | | ||| ||| | | || ||| |||| | || | |
Sbjct 37785 GCTGTAGGCATTGGTGCAATAAGCAAAGAATTGCGAACGCCGTGT-TTCTTAATTGACGT 37843
Query 75872 TTTAGATAT-TTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAG 75930
|||| | | ||||| ||||| | ||||| ||| || ||| | || || ||||
Sbjct 37844 TTTAAGTGTATTCCAGTCCCATAAATCTGTTGGAGTTTTATTCCACATGTCATACTGTAA 37903
Query 75931 AATTCCGTTGCTAGCATATGATCCATT-ATATGTTTCGTA--AGTCCCGTCCTTTTCAGC 75987
||| || || || | | | | | || |||||||||||| || | || ||| | ||
Sbjct 37904 AATACCTTTACTCAC-TGGGCTGCCTTCATATGTTTCGTAGTAGCCATGTTCTTGT--GC 37960
Query 75988 TAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAG 76047
|| |||||||| ||||| | ||| || |||| ||||| |||||||||| || || ||
Sbjct 37961 GAGCTCGCAACTTGCCTCGAGCGCTCCAAAATATATTGTCTCGAAAATCTGCTGGTTTAG 38020
Query 76048 ATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCC 76107
| || ||| || || ||||||| | | | || | |||||| || | ||
Sbjct 38021 AAGAGATGCCTCATCGCTTTCGTAAGGATACCGCATTAAGATCAGTGCATCGGCAAAGCC 38080
Query 76108 CTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTCAGCTTCTGGAATAGG 76167
|||||| ||||| |||||||| | || || || || ||| ||| ||||| | |||
Sbjct 38081 CTGAACACCAATTCCAATAGGACGGTGCCTTAAGTTCGATTTTTTAGCCTCTGGTAGAGG 38140
Query 76168 GTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTT 76227
||| | || ||||| || ||||| || | ||| | ||| | || || || ||
Sbjct 38141 ATAAAAGTTGATATCAATTATTTTGTTCAAGTTTTTTGTAACAATCTTTGTTACATCTTT 38200
Query 76228 TAGTTTGAGAAAATCAAATTTTCCATC---TATCACAAACATATTAAGAGCTATAGATGC 76284
| ||| ||| || ||||| || | ||||||||||| || ||||| || ||
Sbjct 38201 CAATTTTTTAAAGTCGTATTTTTTTTCGGGAGTGACAAACATATTGAGGGCTATGGAAGC 38260
Query 76285 TAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATT 76344
|| || ||||| || | |||| || || ||| | | || || || |||| |||
Sbjct 38261 TAAGTTGCAAACAGCAATTTCATCAGGGGCGGAATACTCCACAATTTCGGTACATAAATT 38320
Query 76345 ACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATA 76404
|| || || || ||||||| |||||||| || || || ||||| || || || |
Sbjct 38321 GCTGCATTTAATGGTTCCAACGTTTTGTTGATTACTTTTGCGATTACAGGAATCTTTGAA 38380
Query 76405 AAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCT 76464
|| | | | ||||| |||||||| | || || || || |||| ||| | |
Sbjct 38381 CAGCATATATGGAGTACCAGTTTCTACTTGAGACTCAATTATAGCAAACCACAGAGATTG 38440
Query 76465 AGCTTTTATT-ATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAA 76523
||||| ||| | |||| | | || | || |||||||| ||| | ||||
Sbjct 38441 CGCTTTAATTGTTCGATTAGCACGGCCT-TCCTGTTCATATTTGACATAGAGTTTATCAA 38499
Query 76524 ATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACT 76583
| || |||||||||||||||| || |||||||||| || || |||||||||||||| |
Sbjct 38500 ACTCTTCTCCCCAAACATCATGTAAGCCAGGACATTTATGTGGGCACATCAATGACCAAT 38559
Query 76584 CACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGAT 76643
| ||| | | ||| || |||||||| ||||| |||||||||| |||| || ||||
Sbjct 38560 CCTCATTAGCTTCAACACGCTTCATAAAAAGATCTGGTATCCATAAAGCATAGAAAAGAT 38619
Query 76644 CTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATAT 76703
|||||| | | ||| || || || || || ||||| | |||| || || | | |
Sbjct 38620 CTCGGGCACGATTTTCCTCCTTGCCAGTGTTTTTTTTTAAGTCTAAAAATTCAAACACGT 38679
Query 76704 CAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGAT 76763
| |||||||| ||||||| ||| || || | |||| || || || ||||||||| |
Sbjct 38680 CTGAATGCCAAGGTTCTAAATAAATTGCAAAGGCACCAGGACGCTTTCCACCTCCCTGGT 38739
Query 76764 CTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTAC 76823
| | ||| | || ||| ||| ||||||| | |||||| | | || || || || |
Sbjct 38740 CAACATAGCGAGCCACGTTGTTAAAAACTCTTAGCATTGGCACCAAACCATTTGAAGTTC 38799
Query 76824 CATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTC 76883
|||| |||||| | || || | || |||||||| || || || ||||
Sbjct 38800 CATTAGTTCCACAGATCGAAGTACCTTTAGCACGAATGCAGTGAACGTTTATCCCGATTC 38859
Query 76884 CTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATAC 76943
| || || ||| || || | || || ||| | | | | | || || || ||
Sbjct 38860 CACCAGCTGATTTGGATATCATTGCGCATTGTTCGACGGATTTAAATATTCCTTCAATTG 38919
Query 76944 TATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCAT 77003
|||| ||| ||| ||||||||||||| |||| ||| | || || ||||
Sbjct 38920 AATCAGCCACCATCGTAAGAAGAAAACACGACGACAGTTGCGGCCGATTTGTAGCTGCCG 38979
Query 77004 TAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAA 77063
|| | ||| || || ||||| ||||| || || ||||| | ||||| |||||||
Sbjct 38980 CGAAAAGTGTTGGCGAAGCATGGGTGAAATATCGCTCGGAAAGCAAGTTGTACGTTTCAA 39039
Query 77064 TAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAG 77123
| || || ||||| ||| ||||| | || |||||||| ||||||||||| |
Sbjct 39040 CTGCCGCATCGATATCTTCGCCATGTATTCCAATGGCCACACGCATTAACATATGCTGTG 39099
Query 77124 GTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAAC 77183
| ||||| || | || |||||| ||||| || ||||| ||| | |||||||| |
Sbjct 39100 GGCGTTCAGCAATTTTCCCATTTATCTTCAATAAATATGAACGTTCAAGCGTTTTAAATC 39159
Query 77184 CAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231
|||||||||||||| |||||| | || ||||| ||| | || ||||
Sbjct 39160 CAAAATAGTTGTATCCAAAGTCCCGATCATAAATTATAGCTGAGTTTA 39207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712629620544000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |