Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq30232 116 9e-21
seq20705 100 7e-16
>seq30232
Length=15380
Score = 116 bits (128), Expect = 9e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || | ||| | ||| ||||| || ||||||||||| |||| | ||| |
Sbjct 15112 GAGACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCG 15171
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || || |||||||| | | |||||| || | | || |||||
Sbjct 15172 TCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTC 15231
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || || ||| |||| | | | ||||| ||| ||||| |||||
Sbjct 15232 CTTGTCTTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGT 15291
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || ||||| || | ||||||||||||| ||||||
Sbjct 15292 GATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
Score = 104 bits (114), Expect = 5e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|| ||||| || ||||||||||| |||| ||||| | || || || || || ||
Sbjct 14906 GTGGACTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCCTCCAGCTGCTTGCCA 14965
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|||||||| | | |||||| || | | || |||||||| ||||| || || ||
Sbjct 14966 GCGAAGATCAAACGCTGCTGATCTGGGGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTA 15025
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| |||| | | | ||||| ||| ||||| ||||| || || ||||| || | |||
Sbjct 15026 ACATTCTCAATGGTATCTGAGGGCTCCACTTCGAGAGTGATGGTCTTGCCAGTCAAGGTC 15085
Query 152088 TTCACGAAGACCTGCAT 152104
|| ||||||| ||||||
Sbjct 15086 TTGACGAAGATCTGCAT 15102
>seq20705
Length=54059
Score = 100 bits (110), Expect = 7e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967
|||||||||||||| |||||||| |||| | ||| | |||||||| | ||| ||
Sbjct 6890 GTAGACTCTTTTTGAATGTTGTAGTCGGACAGAGTGCGACCATCTTCCAATTGTTTGCCA 6949
Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027
|| ||||| || | || || || | | ||||| || || || ||||| || ||||
Sbjct 6950 GCAAAGATCAGACGTTGTTGATCTGGAGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTG 7009
Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087
||| | || | | || ||| || || ||||| || || || |||||||| || |||
Sbjct 7010 ACATTTTCGATTGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 7069
Query 152088 TTCACGAAGACCTGCATT 152105
|| ||||| | |||||||
Sbjct 7070 TTAACGAAAATCTGCATT 7087
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153315210148200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |