Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scaptodrosophila_20lebanonensis_20[genbank_20GCA_5F001014445.1_20201
5-05-28] 34,200 sequences; 187,416,727 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq30232 120 3e-22
>seq30232
Length=15380
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| ||||| ||| ||||||||| ||||| ||||||||
Sbjct 15104 CCACCACGGAGACGGAGCACCAAATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 15163
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || ||||||||||| ||||| |||| ||||| || || | ||||
Sbjct 15164 AGAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGGGA 15223
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814
| || ||||||| | ||| | || || | ||| | | || || | ||||||
Sbjct 15224 ATGCCTTCCTTGT-CTTGAATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCAC 15282
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || || |||| ||||| ||||| ||||||||
Sbjct 15283 TTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 15330
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693
|||| ||||| | ||| | ||||| |||| ||| ||||||||| ||||| |||||||
Sbjct 14874 CGCCACCGCGCAAACGGAGCACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGG 14933
Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753
| | ||||| |||| || ||||||||||| ||||| |||| ||||| || || | ||
Sbjct 14934 ACAAAGTGCGTCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAAACGCTGCTGATCTGGGG 14993
Query 41754 GAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCA 41813
||| || |||||||| ||| || ||| | | | || || | |||||
Sbjct 14994 GAATGCCTTCCTTGTCTTGGATCTTGGCCTTAACATTCTCAATGGTATCTGAGGGCTCCA 15053
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || || || || |||| ||||| ||||| ||||||||
Sbjct 15054 CTTCGAGAGTGATGGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGCAT 15102
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462106365040000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |