Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2744 91.5 2e-13
>seq2744
Length=396707
Score = 91.5 bits (100), Expect = 2e-13
Identities = 133/186 (72%), Gaps = 4/186 (2%)
Strand=Plus/Minus
Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283
||||||||| ||| ||||||||| |||||| | |||||||| |||||||||||
Sbjct 261024 CTTCGTCTCGTGAGATGAGTTCGTTGCTAAAAGTGAGGCCTGGCATGACTCCTCGTTTCT 260965
Query 16284 TTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACAGATGCAAA 16341
| | ||| || || || ||||| || | | |||| || |||||||| || | || ||
Sbjct 260964 TCAGCCAAAAGATAGCCGCAAAACTGCCGCTGAAA--AAAATACCCTCGACTGCCGCGAA 260907
Query 16342 AGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTC 16401
||||||| ||||| | | |||||| | || | |||||| ||| | |||| |
Sbjct 260906 TGCGATTACACGTTCTGGAAATGTAGCACTCTCATGATTAATCCAGTTCAATGCCCACTT 260847
Query 16402 GGCTTT 16407
||||||
Sbjct 260846 GGCTTT 260841
Score = 89.7 bits (98), Expect = 5e-13
Identities = 141/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 16465 ATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGC 16524
|||| ||| || || ||||| || ||| ||||||||| || || || |||||||||||
Sbjct 260667 ATCGGATATGTAAGTTTCAATGAGCAAAGAGTACATTTCAGAATGGATATTCTCTATGGC 260608
Query 16525 TATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCC--ACGTAAAATCGT 16582
|| || || || ||||| || || || || || |||| |||||| || || ||
Sbjct 260607 AATTTGGAAGCCGTAGAAACAACGTGCTTCGGCGATTTTCACTTCCTGACTGAACCTC-- 260550
Query 16583 TCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTA 16642
|| ||| |||||||| |||||||| || || || || || ||||| | ||
Sbjct 260549 TCAATCAGATTCTCATTGACGATACCATCGGAAGCGGCGAAGAATGCCAAGACATGAGAG 260490
Query 16643 ATGAAATATTTTTCGTCAGA 16662
|| |||||||| || || ||
Sbjct 260489 ATAAAATATTTCTCATCGGA 260470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510970038420520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |