Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq2744 91.5 2e-13 >seq2744 Length=396707 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/186 (72%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 ||||||||| ||| ||||||||| |||||| | |||||||| ||||||||||| Sbjct 261024 CTTCGTCTCGTGAGATGAGTTCGTTGCTAAAAGTGAGGCCTGGCATGACTCCTCGTTTCT 260965 Query 16284 TTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAACAGATGCAAA 16341 | | ||| || || || ||||| || | | |||| || |||||||| || | || || Sbjct 260964 TCAGCCAAAAGATAGCCGCAAAACTGCCGCTGAAA--AAAATACCCTCGACTGCCGCGAA 260907 Query 16342 AGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTC 16401 ||||||| ||||| | | |||||| | || | |||||| ||| | |||| | Sbjct 260906 TGCGATTACACGTTCTGGAAATGTAGCACTCTCATGATTAATCCAGTTCAATGCCCACTT 260847 Query 16402 GGCTTT 16407 |||||| Sbjct 260846 GGCTTT 260841 Score = 89.7 bits (98), Expect = 5e-13 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 16465 ATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGC 16524 |||| ||| || || ||||| || ||| ||||||||| || || || ||||||||||| Sbjct 260667 ATCGGATATGTAAGTTTCAATGAGCAAAGAGTACATTTCAGAATGGATATTCTCTATGGC 260608 Query 16525 TATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCC--ACGTAAAATCGT 16582 || || || || ||||| || || || || || |||| |||||| || || || Sbjct 260607 AATTTGGAAGCCGTAGAAACAACGTGCTTCGGCGATTTTCACTTCCTGACTGAACCTC-- 260550 Query 16583 TCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTA 16642 || ||| |||||||| |||||||| || || || || || ||||| | || Sbjct 260549 TCAATCAGATTCTCATTGACGATACCATCGGAAGCGGCGAAGAATGCCAAGACATGAGAG 260490 Query 16643 ATGAAATATTTTTCGTCAGA 16662 || |||||||| || || || Sbjct 260489 ATAAAATATTTCTCATCGGA 260470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510970038420520