Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq5636 107 1e-18 >seq5636 Length=11654 Score = 107 bits (118), Expect = 1e-18 Identities = 148/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 101753 GTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCT 101812 || |||||||| |||||| |||| | |||||||| || || |||||||||||||| Sbjct 743 GTAACATGAGCGATCATGTAAGTCAGCAGAGAATACGATGCTATATTAAATGGCACTCCC 802 Query 101813 AACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAA 101872 || |||||||| || ||||||||| || ||| ||| | | ||| | | || ||| Sbjct 803 AAACCCATATCCGCGCTTCTTTGATAAAGCTGAGCGGACAATTCTCCGTTATTTACGTAA 862 Query 101873 AATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAAC--ATTCC 101930 || || ||| || || || |||||| ||||||| ||||| || || | ||||| Sbjct 863 AACTGTACGAATGTGTGGCACGGTGGCAACGCCATTTTTGGAATATC--AACCGGATTCC 920 Query 101931 AAGCACACATTAACATCCTTCTATC 101955 |||| |||||| || | |||||| Sbjct 921 AAGCCGACATTATAATACGTCTATC 945 Score = 107 bits (118), Expect = 1e-18 Identities = 158/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| || || ||||| | ||| ||||| ||||| ||||| || | ||| || | Sbjct 1116 CTTTGTATTCGGCGCCAAAATGTCGCCATTGAAAACCATAGACAGGCCCCAAATCACCCT 1175 Query 102093 CATCTCTGTCATAAAAACC--AAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCA 102150 | |||| || || || ||| | | | ||| | | || |||||| ||||||| Sbjct 1176 CTTCTCGGTTGGTGAAGCCGTAAGAGT--CCAGAAAAGCCCGCGAACCATTCTCATCCCA 1233 Query 102151 AATGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAA 102210 |||||| | || ||| || || || | || |||||| |||||||||||| Sbjct 1234 AATGTGAATACCCTTGTCTGTTAATTCCTTAGAATTTGTCGATCCTTTGATAAACCACAG 1293 Query 102211 CAGTTCTTCAACAACACCTCTCCAAAATACTCTCTTAGTAGT 102252 |||||| ||||| || ||| |||||||||||||||||| || Sbjct 1294 CAGTTCCTCAACCACCGCTCGCCAAAATACTCTCTTAGTTGT 1335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360945160514261