Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2744 104 3e-17 seq5686 95.1 1e-14 seq4102 95.1 1e-14 >seq2744 Length=396707 Score = 104 bits (114), Expect = 3e-17 Identities = 94/116 (81%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 24633 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 24692 |||||||| | |||||||| || || | |||||||||||||| | |||||| ||| || Sbjct 260280 ACTTCTTCTATGGTCCAAAAAGAGGCTACAGCCTTTTTATACATCTCCCAGATATCAGGA 260221 Query 24693 TATTGAATTGGAAAAATAACAAATCTATTTGGA-TTTTTTGCAAGGATTGGTTCCA 24747 |||||||| |||||||| ||||| | ||||||| || |||| || | |||||||| Sbjct 260220 TATTGAATAGGAAAAATTACAAAACGATTTGGACCTTCTTGC-AGCAGTGGTTCCA 260166 >seq5686 Length=2262380 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 53384 CCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCA 53443 ||| |||||| || || || |||| || ||||| ||| ||||| || ||||| || Sbjct 1099430 CCTTCATATGACTCATAAGGACCTTTCTCAATAGCTATTTCGCAACTTGCTTCTAAAGCG 1099489 Query 53444 CCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAAT 53503 || ||||||| ||||| || || | | || || || | ||||| ||| |||||| Sbjct 1099490 CCATAATAAAGAGTTTCAAAAATTTGGATGTTGAGTTCCTTAGCTTCGTCGCTTTCAAAT 1099549 Query 53504 GGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACC 53553 ||||| | | | || ||||| |||||||||||||| |||| |||||| Sbjct 1099550 GGATACCTCATTAAGATCAACGCATCTGCTAATCCTTGTACACTAATACC 1099599 >seq4102 Length=4342353 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 53093 ATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 53152 || || || | |||||| ||| | || || ||| || ||||||||||| || | Sbjct 713418 ATGTCTTCGTCCCATAAACCTCTGGCAGTCAAGTCTCGCAGTAGATGCGGATTGACGATG 713359 Query 53153 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGAC 53212 ||| |||||||||||||| | || ||| ||||| || || |||||||| | ||| Sbjct 713358 ACAAACTCTCCAGACAATACGCGCCTCACGTAGATATTGCTCGTGTACGGTTCAATAGAT 713299 Query 53213 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGC 53259 || ||||| || ||||| || || || || || || ||||||||||| Sbjct 713298 TCGTTATTCCCTAAAATCTGCGCTGTCGAGGCCGTTGGCATAGGTGC 713252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593205722723280