Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq5636 100 2e-16 >seq5636 Length=11654 Score = 100 bits (110), Expect = 2e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 || ||||| |||||||| |||| | |||||||| || || ||||| ||||| || Sbjct 743 GTAACATGAGCGATCATGTAAGTCAGCAGAGAATACGATGCTATATTAAATGGCACTCCC 802 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 | |||||||| || ||||||||| | |||| ||| | | ||| | | || ||| Sbjct 803 AAACCCATATCCGCGCTTCTTTGATAAAGCTGAGCGGACAATTCTCCGTTATTTACGTAA 862 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| ||| || || || ||||||||||||||||||| ||| | ||||||| Sbjct 863 AACTGTACGAATGTGTGGCACGGTGGCAACGCCATTTTTGGAATATCAACCGGATTCCAA 922 Query 97297 GCACACATCAACATTCTTCTATC 97319 || |||| | || | |||||| Sbjct 923 GCCGACATTATAATACGTCTATC 945 Score = 98.7 bits (108), Expect = 7e-16 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 ||||| || |||||||| | |||||| || ||||| ||||| || | || || |||||| Sbjct 1121 TATTCGGCGCCAAAATGTCGCCATTGAAAACCATAGACAGGCCCCAAATCACCCTCTTCT 1180 Query 97462 CTATCACAGAAACC--AAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGT 97519 | | ||| || ||| | | | | | | || || ||||| |||||||||||| Sbjct 1181 CGGTTGGTGAAGCCGTAAGAGT--CCAGAAAAGCCCGCGAACCATTCTCATCCCAAATGT 1238 Query 97520 GCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATT 97579 | | ||| ||| | || || | || |||||| |||||||||||| || || Sbjct 1239 GAATACCCTTGTCTGTTAATTCCTTAGAATTTGTCGATCCTTTGATAAACCACAGCAGTT 1298 Query 97580 CTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGT 97616 | || || || ||| ||||||||||||||||||||| Sbjct 1299 CCTCAACCACCGCTCGCCAAAATACTCTCTTAGTTGT 1335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346490216624270