Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq4102 107 4e-18 >seq4102 Length=4342353 Score = 107 bits (118), Expect = 4e-18 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 248828 TTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAAC 248887 ||| |||||||||||| || | | ||||| || ||||| |||||||||| || || Sbjct 711459 TTGGTTTCAAAACGCTCGAAAGAAGCTATCTGCTGAAAATCAATGGCAAGATAGTTGAGA 711518 Query 248888 GAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCG 248947 | ||| || ||||||||| |||| ||||| || |||||| | | ||||| || | | Sbjct 711519 GGCCTCAACATATGTTGATGAGAGTAGCTGTTGGTATTCACGAAAACGACATTGACAAAG 711578 Query 248948 TGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCT 249007 | | || ||||||| || |||||| | | |||||||| |||| ||||| | Sbjct 711579 TTATAGAAACGTACAATTATTTGTCTGAACGATATTTTACACATGCTTCACCAACGCTAT 711638 Query 249008 TCAACGCCGGTACCGTCAACAATCAGCTGA 249037 ||||||| |||| |||||||||| || Sbjct 711639 TCAACGCTTGTAC---TAACAATCAGCAGA 711665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072810093242048