Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq5636 102 2e-16
seq4102 86.0 1e-11
>seq5636
Length=11654
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 35524 TCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGC 35583
|||||| |||||| | || || ||| |||| |||||||| | ||| ||| |||||
Sbjct 952 TCCAGAGGATAGACGTATTATAATGTCGGCTTGGAATCCGGTTGATATTCCAAAAATGGC 893
Query 35584 TCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643
| || || ||||||| | || ||||| || ||| ||||||||||| ||
Sbjct 892 GTTGCCACCGTGCCACACATTCGTACAGTTTTACGTAAATAACGGAGAATTGTCCGCTCA 833
Query 35644 GTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTC 35703
| | ||||| |||||| ||| | || ||||| ||||| || ||||| ||||| || ||
Sbjct 832 GCTTTATCAAAGAAGCGCGGATATGGGTTTGGGAGTGCCATTTAATATAGCATCGTATTC 773
Query 35704 TCTTCTGACTCATCTGATGGC 35724
||| |||||| | |||| ||
Sbjct 772 TCTGCTGACTTACATGATCGC 752
>seq4102
Length=4342353
Score = 86.0 bits (94), Expect = 1e-11
Identities = 125/175 (71%), Gaps = 4/175 (2%)
Strand=Plus/Minus
Query 94165 TTCACAAACTTGTTGACTGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCA 94224
|| |||||| | || || |||||||| || ||||||||||| ||| |||| | | | ||
Sbjct 712664 TTGACAAACATATTAACAGCGATAGACGCTAAATTGCACACAGCAACTTCCCCAGGACCA 712605
Query 94225 CTGTACTGGACAATTTCAGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGG 94284
|| | ||||||||||| |||| ||| | ||||| |||| | || || ||
Sbjct 712604 GAATATTCAACAATTTCAGTACACAGATTGCTGCATTTGATAGTGCCTAAATGTTGGTGA 712545
Query 94285 TTAGACTTTCTATT--GATGGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTC 94337
|| || |||| ||| ||| | | ||||| || ||||||||||||||||||
Sbjct 712544 TTTGATTTTCGATTACAATGATCTTTGTAAAG--CATATAAGGTGTTCCAGTTTC 712492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 988702666903005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |