Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq5636 102 2e-16 seq4102 86.0 1e-11 >seq5636 Length=11654 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 35524 TCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGC 35583 |||||| |||||| | || || ||| |||| |||||||| | ||| ||| ||||| Sbjct 952 TCCAGAGGATAGACGTATTATAATGTCGGCTTGGAATCCGGTTGATATTCCAAAAATGGC 893 Query 35584 TCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCA 35643 | || || ||||||| | || ||||| || ||| ||||||||||| || Sbjct 892 GTTGCCACCGTGCCACACATTCGTACAGTTTTACGTAAATAACGGAGAATTGTCCGCTCA 833 Query 35644 GTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGCATCATACTC 35703 | | ||||| |||||| ||| | || ||||| ||||| || ||||| ||||| || || Sbjct 832 GCTTTATCAAAGAAGCGCGGATATGGGTTTGGGAGTGCCATTTAATATAGCATCGTATTC 773 Query 35704 TCTTCTGACTCATCTGATGGC 35724 ||| |||||| | |||| || Sbjct 772 TCTGCTGACTTACATGATCGC 752 >seq4102 Length=4342353 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/175 (71%), Gaps = 4/175 (2%) Strand=Plus/Minus Query 94165 TTCACAAACTTGTTGACTGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCA 94224 || |||||| | || || |||||||| || ||||||||||| ||| |||| | | | || Sbjct 712664 TTGACAAACATATTAACAGCGATAGACGCTAAATTGCACACAGCAACTTCCCCAGGACCA 712605 Query 94225 CTGTACTGGACAATTTCAGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGG 94284 || | ||||||||||| |||| ||| | ||||| |||| | || || || Sbjct 712604 GAATATTCAACAATTTCAGTACACAGATTGCTGCATTTGATAGTGCCTAAATGTTGGTGA 712545 Query 94285 TTAGACTTTCTATT--GATGGTATCCTTAAAGCACACATAAGGTGTTCCAGTTTC 94337 || || |||| ||| ||| | | ||||| || |||||||||||||||||| Sbjct 712544 TTTGATTTTCGATTACAATGATCTTTGTAAAG--CATATAAGGTGTTCCAGTTTC 712492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 988702666903005