Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq2744 84.2 3e-11 >seq2744 Length=396707 Score = 84.2 bits (92), Expect = 3e-11 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189 ||||| || || | ||||| ||||| |||| |||||||| |||||||| || |||||| Sbjct 260485 TTTATCTCTCATGTCTTGGCATTCTTCGCCGCTTCCGATGGTATCGTCAATGAGAATCTG 260544 Query 125190 -TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCA 125248 |||| | | ||| ||| || ||| || | || | || || ||||| ||||| Sbjct 260545 ATTGAGAGG-TTCAGTCAGGAAGTGAAAATCGCCGAAGCACGTTGTTTCTACGGCTTCCA 260603 Query 125249 AATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCG 125308 ||| || ||||| | || || |||||||||||| || ||||| | ||||| Sbjct 260604 AATTGCCATAGAGAATATCCATTCTGAAATGTACTCTTTGCTCATTGAAACTTACATATC 260663 Query 125309 CGATCCGCAA 125318 ||||||| || Sbjct 260664 CGATCCGAAA 260673 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 |||||||| || || ||||| || || || || ||||||||||| ||||||||||| Sbjct 260904 GCATTCGCGGCAGTCGAGGGTATTTTTTTCAGCGGCAGTTTTGCGGCTATCTTTTGGCTG 260963 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 ||||| || ||| ||||||| || || || || ||||| | || || |||||||| Sbjct 260964 AAGAAACGAGGAGTCATGCCAGGCCTCACTTTTAGCAACGAACTCATCTCACGAGACGA 261022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740415302924360