Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq68007 150 1e-31
seq52431 125 5e-24
seq5959 109 4e-19
seq5117 105 5e-18
seq1104 96.9 3e-15
>seq68007
Length=840
Score = 150 bits (166), Expect = 1e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 15148 TCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGC 15207
|| ||||||||| || || || || || ||||| |||||||||||| ||| | || |
Sbjct 456 TCGTAAAACTAAGTGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTCCTACC 397
Query 15208 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTT 15267
|||||||| ||||| || ||| | || ||||| ||||| || ||| |||||||||||
Sbjct 396 GTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGCTGTTGATCAGGTGGGATTCCTTCTTT 337
Query 15268 GTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAAT 15327
|| |||||| ||||| ||||||||||||| | ||| || || | ||||||
Sbjct 336 ATCTTGTATTTTGGCTTTTACGTTTTCTATGGTATCCGAAGCTTCAACTTCAAGGGTAAT 277
Query 15328 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || || ||||| || ||||||||||||||
Sbjct 276 TGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGCAT 241
Score = 140 bits (154), Expect = 2e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| | |||||| || || || ||||| ||||| || ||| ||| |||| | || ||
Sbjct 222 AACCAGATGAAGTGTTGATTCCTTTTGAATGTTATAGTCGGAAAGAGTTCTGCCATCCTC 163
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| |||||||||||| | |||||||||||||| || |||||||| ||||||||
Sbjct 162 CAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGGGAATTCCCTCTTTGTCCTG 103
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
|||||| ||| ||| ||||||| || || | ||| || || | ||| ||||||||
Sbjct 102 GATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGTTTT 43
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||| || ||||||||||| || || |||||
Sbjct 42 ACCCGTAAGAGTTTTTACGAAGATCTGCAT 13
>seq52431
Length=384
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
||||| | |||||| ||||| || ||||| |||||||| ||| ||| |||| | ||
Sbjct 289 AAAACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTTCTACCATCC 230
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | |||||| ||||| | |||| ||| || || || |||||||| ||||||||
Sbjct 229 TCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCT 170
Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331
|||||| ||| ||| ||||||| || || | ||| || || | ||| ||||||
Sbjct 169 TGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGTT 110
Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||||| || ||||| || || || || |||||
Sbjct 109 TTACCCGTGAGAGTCTTCACGAAGATCTGCAT 78
>seq5959
Length=1871824
Score = 109 bits (120), Expect = 4e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210
|| ||||| |||||| || || || || || |||||||| ||| ||| |||| | ||
Sbjct 1420651 TAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTTCCATC 1420710
Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270
||| | ||| || ||||| | |||| |||||| || || || || |||||||||||
Sbjct 1420711 TTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCTTCTTTGTC 1420770
Query 15271 ACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGG 15329
|| || ||| || ||| | ||||| ||||| | ||| || || | || ||||
Sbjct 1420771 TTGGATCTTAGCT-TTGACATTCTCTATAGTATCAGAAGCTTCCACCTCAAGAGTGATGG 1420829
Query 15330 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|||| || || || ||||| ||||| ||||||||
Sbjct 1420830 TTTTTCCAGTGAGGGTTTTCACAAAGATTTGCAT 1420863
Score = 104 bits (114), Expect = 2e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 15179 TGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAA 15238
|| |||||||| ||| ||| |||| | || || | |||||| ||||| | |||| |
Sbjct 1420451 TGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGA 1420510
Query 15239 CGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATG 15298
|| || || || |||||||| |||||||| |||||| ||| ||| |||||||
Sbjct 1420511 CGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATT 1420570
Query 15299 GTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATT 15358
|| || | ||| || || | ||||||||||| || || ||||| || ||||| |||
Sbjct 1420571 GTGTCTGAAGCTTCAACTTCAAGAGTAATGGTTTTGCCAGTAAGAGTCTTCACAAAGATT 1420630
Query 15359 TGCAT 15363
|||||
Sbjct 1420631 TGCAT 1420635
>seq5117
Length=2329582
Score = 105 bits (116), Expect = 5e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 15149 CTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCG 15208
|| ||||| ||||| || ||||| || ||||| ||||| ||||| || | | ||
Sbjct 1167847 CTCAAAACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGACCG 1167788
Query 15209 TCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTG 15268
||||| | |||||| ||||| | ||||| | ||||| || ||||||||||| |||
Sbjct 1167787 TCTTCGAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTG 1167728
Query 15269 TCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATG 15328
|| ||||||| || ||| | || || || || || || || || || |||
Sbjct 1167727 TCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATG 1167668
Query 15329 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| || || |||| |||||| |||||||| ||||||
Sbjct 1167667 GTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCATA 1167632
Score = 102 bits (112), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|| || | |||||| | ||| || |||||||| || || || || || ||||| ||
Sbjct 1164794 CCGCCGCGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGAC 1164735
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | | ||||||| | || || |||||| | ||||||||||| ||||| |||
Sbjct 1164734 AAGGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGTGGG 1164675
Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||| ||||| ||| ||||| |||||| | || || || ||| | || ||
Sbjct 1164674 ATGCCTTCCTTGTCCTGAATCTTTGC-CTTTACGTTCTCAATAGTGTCGGAAGCCTCGAC 1164616
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| | ||| ||||| || || |||| || ||||||||||| |||||
Sbjct 1164615 CTCGAGGGTTATGGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCAT 1164568
Score = 98.7 bits (108), Expect = 7e-16
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||| | | ||| ||||| ||||| | ||||| |||||||| || ||||||||
Sbjct 1167403 CCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAG-- 1167346
Query 15197 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTG 15254
| ||| || ||||||| | ||||| || || | ||||| | ||||| ||| |
Sbjct 1167345 ACAATGTGCGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAG 1167286
Query 15255 GAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314
|||| ||||||||||| |||||| ||| || | || || || || | || |
Sbjct 1167285 GAATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGA 1167226
Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
| || || || ||||| || ||||| | |||||| || ||||| ||||||
Sbjct 1167225 CCTCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCATA 1167176
Score = 87.8 bits (96), Expect = 1e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| ||||| | || || ||||| || ||||||||||| |||| ||| | |||||
Sbjct 1165233 AACCAAATGCAATGTTGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGGCCATCTTC 1165174
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| ||||| || ||| | ||||| | || || || || |||||||| || ||
Sbjct 1165173 GAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATCCTG 1165114
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||||||| || ||| | || || || || || || || || || ||||| ||
Sbjct 1165113 AATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTT 1165054
Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| |||| |||||| |||||||| ||||||
Sbjct 1165053 TCCCGTCAAAGTTTTGACAAAAATCTGCATA 1165023
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||||| ||| | | ||| || || | ||| || || || || || || |||||
Sbjct 1167631 CCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCTGAG 1167572
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | ||||||| | ||| || ||||| | ||||| | || || || ||
Sbjct 1167571 AGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGG 1167512
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|||||||||||||| |||||| ||| || ||| | || || || || ||| ||
Sbjct 1167511 ATTCCTTCTTTGTCCTGAATTTTAGCT-TTAACATTCTCGATCGTGTCTGATGCTTCGAC 1167453
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
|| | || || |||||||| || || ||||| |||||||| ||||||
Sbjct 1167452 TTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGACAAAAATCTGCATA 1167404
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
||||||| ||| | | ||| || || | ||| || || || || || || |||||
Sbjct 1165022 CCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCTGAG 1164963
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
||| | | ||||||| | ||| || ||||| | ||||| | |||||| || ||
Sbjct 1164962 AGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGATCCGGAGGG 1164903
Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315
|| ||||||||||| |||||| ||| || || | || || || || | ||||||
Sbjct 1164902 ATGCCTTCTTTGTCCTGAATTTTCGCT-TTGACGTTCTCGATCGTGTCCGAAGCTTCTAC 1164844
Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || ||||| || || || |||| ||||| || || || |||||
Sbjct 1164843 CTCCAAAGTAATTGTCTTTCCCGTCAAGGTTTTAACGAAGATCTGCAT 1164796
>seq1104
Length=1074228
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 15174 CTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATA 15233
|||| || |||||||||||| ||| | | | | || || | |||||||||||| | |
Sbjct 391034 CTTTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAGA 390975
Query 15234 TCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTT 15293
| | || ||||| || ||| ||||| || ||||| || ||| ||| ||| | |
Sbjct 390974 TGAGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTCT 390915
Query 15294 CTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAA 15353
| ||||| ||| ||||| || | ||||||||| ||||| || || ||||| ||||
Sbjct 390914 CGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACAA 390855
Query 15354 AAATTTGCATA 15364
| || ||||||
Sbjct 390854 AGATCTGCATA 390844
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361872374344851
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