Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq1224 196 3e-45 >seq1224 Length=1459445 Score = 196 bits (216), Expect = 3e-45 Identities = 358/522 (69%), Gaps = 2/522 (0%) Strand=Plus/Plus Query 3617 AATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAGTGAATATATG 3676 || |||||| | | ||||| || || |||||||| |||||||||||||| ||||| | Sbjct 1271970 AACGAATTGCTGTTCTTTGCGGATGTGTGCGCTGGGCCAGGTGGTTTCAGCGAATACGTT 1272029 Query 3677 TTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTT-ACGCGaaaaaaaTGA 3735 |||| || ||||| ||| || ||| || | ||| | || || | | | | || ||| Sbjct 1272030 TTATCCAGGAAGAAGTGGCATGCCAAGGGATTTGGATTCACCTTGAAGAGCAGCAA-TGA 1272088 Query 3736 TTTTCAACTGAACAGATTTTACGATAACTTTTCGGAAACTTTACACCCGTATTATGGTCC 3795 |||| | || | |||| | | | | |||||||| || || | |||||| || Sbjct 1272089 TTTTACATTGGATGAGTTTTTTGCTGGCCCATGTGAAACTTTTCATCCATTTTATGGACC 1272148 Query 3796 GCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTTGTGAAATGATTAT 3855 |||||| || | || ||| | || |||||| | | ||| | | |||||| Sbjct 1272149 CAAGGGCGATGGAGATGTATATAATCCGCAGAATCAGGAGGCATTTCAAGCACTGATTAA 1272208 Query 3856 GAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGA 3915 |||| ||||||| ||||||||||| || |||||| | || || || |||||||| || Sbjct 1272209 GAAACATACCGACAATAAAGGTGTACACTTCATGATGTCAGATGGCGGATTCTCGGTGGA 1272268 Query 3916 GGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAAT 3975 || || ||||| || ||||| || | || || || |||| | || || |||||| | Sbjct 1272269 AGGACAGGAAAACATTCAAGAGATTCTGTCAAAGCAGTTGTACCTATGCCAGTGTTTAGT 1272328 Query 3976 TGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTAC 4035 || | ||||| | || | ||| |||| |||| ||| | |||||| | ||||| Sbjct 1272329 GGCCCTTATGATTGTGAGACCGGATGGACATTTCGTTACAAAACTGTTCGATCTGTTTAC 1272388 Query 4036 ACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTT 4095 ||||||||||| || | | || ||||||| | | ||| | |||||| ||||| Sbjct 1272389 ACCTTTTAGTGTCGGGCTCATTTACCTGATGTACAAGTGTTTCGACAGTATTTCCATTTT 1272448 Query 4096 CAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137 ||| || || || |||| |||||||||||| |||| || Sbjct 1272449 CAAGCCCAATAGTTCCAGACCAGCCAATTCTGAACGATACTT 1272490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276319313383033