Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq68007 143 2e-29
seq5117 141 8e-29
seq52431 131 2e-25
seq5959 129 5e-25
seq1104 89.7 5e-13
seq514 87.8 2e-12
>seq68007
Length=840
Score = 143 bits (158), Expect = 2e-29
Identities = 177/242 (73%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || |||||||| | |||| |||| || | || ||||||||||| |
Sbjct 252 AAAAATTTGCATTCCTCCTCGAAGGCGCAGAACCAGATGAAGTGTTGATTCCTTTTGAAT 193
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||| ||| | ||| || ||||||||| ||||| || |||| || || | |||
Sbjct 192 GTTATAGTCGGAAAGAGTTCTGCCATCCTCCAGTTGTTTGCCAGCAAAAATCAAACGTTG 133
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||||| ||||| || |||||||| | ||||| ||||| || | | |||||
Sbjct 132 TTGATCTGGGGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTC 73
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || |||| ||||||||||| || ||||||||||| || |||||||||||
Sbjct 72 TGAAGCTTCAACTTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTTACGAAGATCTGCAT 13
Query 95008 GC 95009
||
Sbjct 12 GC 11
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| | | ||| || || ||||| | |||||||||||||| | ||| ||||||
Sbjct 467 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAA 408
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | || || |||||||| || | |||||||| | || ||||| || ||
Sbjct 407 AGAGTCCTACCGTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGCTGTTGATCAGGTGGG 348
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| |||||||| || | ||||| || || ||| | | || || | || ||
Sbjct 347 ATTCCTTCTTTATCTTGTATTTTGGCTTTTACGTTTTCTATGGTATCCGAAGCTTCAACT 288
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || || ||||| || || ||||| |||||||| || |||||
Sbjct 287 TCAAGGGTAATTGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGCAT 241
>seq5117
Length=2329582
Score = 141 bits (156), Expect = 8e-29
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| ||| ||||| ||||| || ||||| ||||| | || ||||| || |||
Sbjct 1167392 TCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGTCC 1167333
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|| || |||||||||||| ||||||| ||||| || ||||| |||||||||||||||||
Sbjct 1167332 GTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAGGAATACCTTCTTT 1167273
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | |||||| ||||| ||| ||| ||||| | ||||| || | |||||
Sbjct 1167272 GTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAATGTGAT 1167213
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| ||||| || | |||||| || || ||||||||
Sbjct 1167212 GGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177
Score = 140 bits (154), Expect = 3e-28
Identities = 161/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA-- 94852
||| ||||| |||| ||| ||||||||||| | ||||||||| || |||| ||
Sbjct 1167845 CAAAACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACA--GTGTGCGACCG 1167788
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| || || |||||||| ||||||| ||||| || |||||||||||||| ||||| |||
Sbjct 1167787 TCTTCGAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTG 1167728
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | |||||| || ||||| ||| ||||| | || || || | ||||||
Sbjct 1167727 TCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATG 1167668
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| ||||| || | |||||| ||||| ||||||||
Sbjct 1167667 GTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1167633
Score = 136 bits (150), Expect = 4e-27
Identities = 161/217 (74%), Gaps = 1/217 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTT-TTGCACGTTATAATCGCTCATAGTGTTGG 94850
|| ||| || || || || ||||||||||| ||| | || ||||| || |||
Sbjct 1167164 TCTCAAAACTAAATGTAACGTAGATTCCTTCTTGAATATTGTAATCAGACAATGTGCGTC 1167105
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
|| || || ||||||||| ||||||| ||||| |||||||| ||||||||||| ||||
Sbjct 1167104 CGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATACCCTCTT 1167045
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | |||||| ||||| ||| ||| ||||| | ||||| || | ||||
Sbjct 1167044 TGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAATGTGA 1166985
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| ||||| |||||||| || || ||||||||
Sbjct 1166984 TAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTGCAT 1166948
Score = 131 bits (144), Expect = 2e-25
Identities = 173/240 (72%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || |||| ||| || | ||||||||||| || |||||||| || |
Sbjct 1167644 AAAAATCTGCATACCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAAT 1167585
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||||| | ||| | || || || || ||||| ||||||| || || ||
Sbjct 1167584 ATTATAATCTGAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTG 1167525
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
|||||| ||||| || ||||||||||| | |||||| || || || ||| |||||
Sbjct 1167524 CTGATCCGGAGGGATTCCTTCTTTGTCCTGAATTTTAGCTTTAACATTCTCGATCGTGTC 1167465
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| ||||| || | ||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct 1167464 TGATGCTTCGACTTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGACAAAAATCTGCAT 1167405
Score = 123 bits (136), Expect = 2e-23
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856
||||| ||||| || ||||| || || | ||| ||||| |||| ||| | ||| |
Sbjct 1165232 ACCAAATGCAATGTTGATTCTTTCTGAATGTTGTAATCAG--ATAGAGTTCGGCCATCTT 1165175
Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
| |||||||||||| | ||||| || || |||||||||||||| || ||||| || || |
Sbjct 1165174 CGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATCCT 1165115
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
|||||| || ||||| ||| ||||| | || || || | |||||||| |
Sbjct 1165114 GAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCT 1165055
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || | |||||| ||||| ||||||||
Sbjct 1165054 TTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1165024
Score = 122 bits (134), Expect = 8e-23
Identities = 171/240 (71%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || |||| ||| || | ||||||||||| || |||||||| || |
Sbjct 1165035 AAAAATCTGCATACCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAAT 1164976
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
|||||||| | ||| | || || || || ||||| ||||||| ||||||||
Sbjct 1164975 ATTATAATCTGAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTG 1164916
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||| ||||| || ||||||||||| | |||||| || |||||| ||| |||||
Sbjct 1164915 TTGATCCGGAGGGATGCCTTCTTTGTCCTGAATTTTCGCTTTGACGTTCTCGATCGTGTC 1164856
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | || || || ||||| || | ||||| || |||||||||||
Sbjct 1164855 CGAAGCTTCTACCTCCAAAGTAATTGTCTTTCCCGTCAAGGTTTTAACGAAGATCTGCAT 1164796
Score = 95.1 bits (104), Expect = 1e-14
Identities = 94/120 (78%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| ||| ||||| ||||| || ||||| || || | ||||||||| ||| ||| ||
Sbjct 1166935 TCTCAAAACCAAATGCAATGTGGATTCTTTCTGAATGTTATAATCAG--ATAATGTGCGA 1166878
Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909
||| || || ||||||||| ||||||| ||||| |||||||| ||||||||||| |||
Sbjct 1166877 CCATCTTCAAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATACCCTCT 1166818
>seq52431
Length=384
Score = 131 bits (144), Expect = 2e-25
Identities = 174/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| ||| || |||||||| | ||||| |||| || | || ||||||||||| |
Sbjct 317 AAAAATTTGCATTCCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGATTCCTTTTGAAT 258
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| || ||| | ||| | |||||| || ||||| || |||| || | | ||
Sbjct 257 GTTGTAGTCGGAAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTG 198
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||||||||||||||| || |||||||| | ||||| ||||| || | | |||||
Sbjct 197 CTGATCTGGAGGAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACATTTTCTATTGTGTC 138
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || |||| ||||||||||| || || ||||| ||||| |||||||||||
Sbjct 137 TGAAGCTTCAACTTCAAGGGTGATGGTTTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 78
Query 95008 GC 95009
||
Sbjct 77 GC 76
>seq5959
Length=1871824
Score = 129 bits (142), Expect = 5e-25
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || |||||||| | || | || | || | ||||| ||||| || | ||| |
Sbjct 1420629 TTTGCATTCCTCCTCGAAGACGTAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGT 1420688
Query 94833 AATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGAT 94892
| ||| | ||| | ||| ||||| || ||||| ||||||| | | ||||||||
Sbjct 1420689 AGTCGGAGAGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGAT 1420748
Query 94893 CTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGT 94952
||||||| |||||||||||||| | || || || ||||| | | ||| ||||
Sbjct 1420749 CTGGAGGGATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATAGTATCAGAAG 1420808
Query 94953 GGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| || |||| ||||||||||||||||| || |||||||||||||| ||||||
Sbjct 1420809 CTTCCACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCACAAAGATTTGCATG 1420864
Score = 102 bits (112), Expect = 7e-17
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| || ||||| || |||| || | | ||||||||||||||||| || |||||
Sbjct 1420480 ATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCTTT 1420539
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||||| ||||| || | | ||||| | || || |||| || ||
Sbjct 1420540 GTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGAGTAAT 1420599
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||| ||||||||||| ||||||||||| |||||
Sbjct 1420600 GGTTTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 1420635
>seq1104
Length=1074228
Score = 89.7 bits (98), Expect = 5e-13
Identities = 135/191 (71%), Gaps = 1/191 (1%)
Strand=Plus/Minus
Query 94818 CCTTT-TGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAG 94876
||||| || | ||| |||||| | |||| ||||||||||||||| || | |||
Sbjct 391035 CCTTTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAG 390976
Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936
|| | | || |||||||| || || || || ||||| | || || ||||| ||
Sbjct 390975 ATGAGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTC 390916
Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996
||| ||||| | | || || |||| || ||||| || || || || |||||||||
Sbjct 390915 TCGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACA 390856
Query 94997 AAGATCTGCAT 95007
|||||||||||
Sbjct 390855 AAGATCTGCAT 390845
>seq514
Length=2723796
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| ||| ||||| |||||||||| ||||||||||| || | ||||| || |
Sbjct 26482 CCGCCTCGCAAGCGCAATACCAAGTGCAGCGTAGATTCCTTCTGGATATTATAGTCCGAC 26541
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| || || ||| |||| || || || |||| || ||||||||||||||||| |||
Sbjct 26542 AATGTCCTGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTTTGCTGATCTGGCGGA 26601
Query 94901 ATACCT 94906
|| |||
Sbjct 26602 ATTCCT 26607
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 94903 ACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTC 94962
|||||||||||| | |||||| ||||| || ||| || |||| || || ||
Sbjct 26979 ACCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATTGTATCAGACGCCTCAACCTC 27038
Query 94963 AATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| |||||||| ||||| ||||||||||| |||||||||||||||
Sbjct 27039 AAGGGTGATGGTCTTTCCCGTAAGAGTTTTTACAAAGATCTGCATG 27084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447901685379960
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