Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1722 201 2e-47 >seq1722 Length=1169549 Score = 201 bits (222), Expect = 2e-47 Identities = 188/239 (79%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | |||||| ||||||||||| || || ||||| || |||||| Sbjct 451613 GCGAAGCGTCACAGGAAAGTTCTTCGCGATAACATCCAGGGTATTACCAAACCGGCTATC 451554 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||| ||||||| |||||||| ||||||||| |||| || ||| |||| ||||||| | Sbjct 451553 CGTCGTTTGGCTCGACGTGGTGGTGTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACT 451494 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || ||||| ||||||| ||| |||||| | |||||| || ||| ||||| Sbjct 451493 CGTGGCGTACTGAAGGTCTTCCTTGAGAACGTTATTCGCGATGCTGTCACCTACACCGAA 451434 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||| | |||||||| || ||||||| |||| || || ||||||| ||||| Sbjct 451433 CACGCGAAAAGGAAGACTGTAACTGCCATGGACGTCGTATACGCCCTGAAACGCCAAGG 451375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79011645606123