Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_006653.1
Length=26062
Score E
Sequences producing significant alignments: (Bits) Value
seq7685 241 2e-59
seq62622 230 4e-56
seq5789 228 1e-55
seq6342 226 5e-55
seq8390 224 2e-54
seq12570 223 6e-54
seq66773 201 2e-47
seq38601 201 2e-47
seq6539 161 2e-35
>seq7685
Length=197898
Score = 241 bits (266), Expect = 2e-59
Identities = 219/278 (79%), Gaps = 25/278 (9%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 148804 TGTATTTTATGCCTGCCCCCCCGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 148745
Query 20640 GGGGCAGGCATCAATTATTT-----TCAACGC------------------AATTTTTAAC 20676
|||||||||||||| | | ||||| |||| ||||
Sbjct 148744 GGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAATAAAATTAATAAC 148685
Query 20677 GTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAGC 20736
||||||||||||| || ||||||||| ||||||||||| |||| ||| |||| | |
Sbjct 148684 GTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAATC 148625
Query 20737 CCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTGCA 20794
| | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||| ||
Sbjct 148624 TCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGAGCC 148565
Query 20795 GGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTA 20832
| || ||||||||| ||||||||||||||||||||||
Sbjct 148564 GAAAATTCAACTTTCGGCCCTTGTAGTGTAATATACTA 148527
Score = 228 bits (252), Expect = 1e-55
Identities = 230/296 (78%), Gaps = 30/296 (10%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 148804 TGTATTTTATGCCTGCCCCCCC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 148746
Query 5275 GGGGGCAGGCATCAA-----tttttttCAACGC------------------AATTTTTAA 5311
||||||||||||||| | | ||||| |||| |||
Sbjct 148745 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAATAAAATTAATAA 148686
Query 5312 CGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGAG 5371
|||||||||||||| || ||||||| | ||||||||||| |||| ||| |||| |
Sbjct 148685 CGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAAT 148626
Query 5372 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGTGC 5429
| | | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| ||
Sbjct 148625 CTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGAGC 148566
Query 5430 AGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATTTCTCTAAACTATAA 5485
| || ||| |||||| |||||||||||||||||||||| || ||| |||||||
Sbjct 148565 CGAAAATTCA-ACTTTCGGCCCTTGTAGTGTAATATACTAATT-TCT--ACTATAA 148514
Score = 132 bits (146), Expect = 8e-27
Identities = 125/164 (76%), Gaps = 23/164 (14%)
Strand=Plus/Plus
Query 18723 CCGAGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTGC---- 18778
||| ||||||||||| | ||||||| || ||||||||||||||||| ||||
Sbjct 148641 CCGCGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTTATTT 148700
Query 18779 --------------GTTGaaaaaaaT-----TGATGCCTGCCCCCGACATTTGCGGCACG 18819
||||| | || |||||||||||||||||||||||||||||
Sbjct 148701 TTTTCACTTTAAATGTTGATGAGCATGTTTTTGATGCCTGCCCCCGACATTTGCGGCACG 148760
Query 18820 AGCGAAGCGAGTGCTGCTGGTCgggggggCAGGCATCAAATACA 18863
|||||||||||||||||||||||||||||||||||| |||||||
Sbjct 148761 AGCGAAGCGAGTGCTGCTGGTCGGGGGGGCAGGCATAAAATACA 148804
Score = 84.2 bits (92), Expect = 4e-12
Identities = 71/82 (87%), Gaps = 4/82 (5%)
Strand=Plus/Plus
Query 18649 AGAAAT-AGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT 18707
|||||| ||||||||||||||||||||| ||||| |||| || | || ||||||| |||
Sbjct 148521 AGAAATTAGTATATTACACTACAAGGGCCGAAAG-TTGAATTTTCGGCTCTGCGCGTCAT 148579
Query 18708 -ATGC-CCGAGGCGAAGCCGAG 18727
|||| ||||||||||||||||
Sbjct 148580 GATGCGCCGAGGCGAAGCCGAG 148601
>seq62622
Length=1328
Score = 230 bits (254), Expect = 4e-56
Identities = 218/281 (78%), Gaps = 27/281 (10%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639
||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 1283 TGTATTTTATGCCTGCCCCCCCAACCAGCAGCACTCGTTTCGCTCGTGCCGCAAATGTCG 1224
Query 20640 GGGGCAGGCATCAATTATTT-----TCAACGC--------------------AATTTTTA 20674
|||||||||||||| | | ||||| |||| ||
Sbjct 1223 GGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAAATAAAATTAATA 1164
Query 20675 ACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGA 20734
||||||||||||||| || ||||||||| ||||||||||| |||| ||| |||| |
Sbjct 1163 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAA 1104
Query 20735 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTG 20792
| | | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||| |
Sbjct 1103 TCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGG 1044
Query 20793 CAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833
| | || ||||||||| |||||||||||||||||||||||
Sbjct 1043 CCGAAAATTCAACTTTCGGCCCTTGTAGTGTAATATACTAT 1003
Score = 214 bits (236), Expect = 3e-51
Identities = 218/284 (77%), Gaps = 29/284 (10%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1283 TGTATTTTATGCCTGCCCCCCCA-ACCAGCAGCACTCGTTTCGCTCGTGCCGCAAATGTC 1225
Query 5275 GGGGGCAGGCATCAA-----tttttttCAACGC--------------------AATTTTT 5309
||||||||||||||| | | ||||| |||| |
Sbjct 1224 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAAATAAAATTAAT 1165
Query 5310 AACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAG 5369
|||||||||||||||| || ||||||| | ||||||||||| |||| ||| ||||
Sbjct 1164 AACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAA 1105
Query 5370 AGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGT 5427
| | | | ||||| | ||||||||||||||||||||||||| |||| ||| |||||||
Sbjct 1104 ATCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGG 1045
Query 5428 GCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471
|| | || ||| |||||| ||||||||||||||||||||||||
Sbjct 1044 GCCGAAAATTCA-ACTTTCGGCCCTTGTAGTGTAATATACTATT 1002
Score = 120 bits (132), Expect = 5e-23
Identities = 71/74 (96%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1210 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAACGAGTGCTGCTGGTTGGGGGGGC 1269
Query 18850 AGGCATCAAATACA 18863
|||||| |||||||
Sbjct 1270 AGGCATAAAATACA 1283
Score = 86.0 bits (94), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 3/78 (4%)
Strand=Plus/Plus
Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATG 18710
|||||||||||||||||||||||| ||||| |||| || | || ||||||| ||| |||
Sbjct 1002 AATAGTATATTACACTACAAGGGCCGAAAG-TTGAATTTTCGGCCCTGCGCGTCATGATG 1060
Query 18711 C-CCGAGGCGAAGCCGAG 18727
| ||||||||||||||||
Sbjct 1061 CGCCGAGGCGAAGCCGAG 1078
>seq5789
Length=839996
Score = 228 bits (252), Expect = 1e-55
Identities = 218/280 (78%), Gaps = 27/280 (10%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 839971 TGTATTTTATGCCTGCCCCCC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 839913
Query 20640 GGGGCAGGCATCAATTATTT-----TCAACGC-------------------AATTTTTAA 20675
|||||||||||||| | | ||||| |||| |||
Sbjct 839912 GGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATAA 839853
Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAG 20735
||||||||||||| || ||||||||| |||||||||||| |||| ||| |||| |
Sbjct 839852 TGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACACGGGCCAAAAGTTGAAAT 839793
Query 20736 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTGC 20793
| | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||| ||
Sbjct 839792 CTTGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGGC 839733
Query 20794 AGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833
| || ||||||||| |||||||||||||||||||||||
Sbjct 839732 CGAAAATTCAACTTTCGGCCCTTGTAGTGTAATATACTAT 839693
Score = 217 bits (240), Expect = 2e-52
Identities = 218/283 (77%), Gaps = 29/283 (10%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 839971 TGTATTTTATGCCTGCCCCCC--GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 839914
Query 5275 GGGGGCAGGCATCAA-----tttttttCAACGC-------------------AATTTTTA 5310
||||||||||||||| | | ||||| |||| ||
Sbjct 839913 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATA 839854
Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGA 5370
| ||||||||||||| || ||||||| | |||||||||||| |||| ||| |||| |
Sbjct 839853 ATGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACACGGGCCAAAAGTTGAAA 839794
Query 5371 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGTG 5428
| | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct 839793 TCTTGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGG 839734
Query 5429 CAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471
| | || ||| |||||| ||||||||||||||||||||||||
Sbjct 839733 CCGAAAATTCA-ACTTTCGGCCCTTGTAGTGTAATATACTATT 839692
Score = 122 bits (134), Expect = 1e-23
Identities = 72/74 (97%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 839899 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTC-GGGGGGC 839957
Query 18850 AGGCATCAAATACA 18863
|||||| |||||||
Sbjct 839958 AGGCATAAAATACA 839971
Score = 86.0 bits (94), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 3/78 (4%)
Strand=Plus/Plus
Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATG 18710
|||||||||||||||||||||||| ||||| |||| || | || ||||||| ||| |||
Sbjct 839692 AATAGTATATTACACTACAAGGGCCGAAAG-TTGAATTTTCGGCCCTGCGCGTCATGATG 839750
Query 18711 C-CCGAGGCGAAGCCGAG 18727
| ||||||||||||||||
Sbjct 839751 CGCCGAGGCGAAGCCGAG 839768
>seq6342
Length=2655192
Score = 226 bits (250), Expect = 5e-55
Identities = 221/286 (77%), Gaps = 29/286 (10%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2006600 TGTATTTTATGCCTGCCCCCCCCGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 2006541
Query 5275 GGGGGCAGGCATCAA---------tttt-----tttCAACGC-------------AATTT 5307
||||||||||||||| | | ||| || | ||||
Sbjct 2006540 GGGGGCAGGCATCAAAAAACATGCTCATCAACATTTAAAAGTGAAAAAAAAATAAAATTA 2006481
Query 5308 TTAACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTG 5367
||||||||||||||||| || ||||||| | ||||||||||| |||| ||| |||
Sbjct 2006480 ATAACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTG 2006421
Query 5368 AGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCA 5425
| | | | | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||
Sbjct 2006420 AAATCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCA 2006361
Query 5426 GTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471
| || | || ||| |||||| |||||||||||| |||||||||||
Sbjct 2006360 GGGCCGAAAATTCAAACTTTCGGCCCTTGTAGTGAAATATACTATT 2006315
Score = 223 bits (246), Expect = 6e-54
Identities = 221/285 (78%), Gaps = 31/285 (11%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGccccccc-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 20638
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2006600 TGTATTTTATGCCTGCCCCCCCCGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 2006541
Query 20639 GGGGGCAGGCATCAA---------TTAT-----TTTCAACGC-------------AATTT 20671
||||||||||||||| | || ||| || | ||||
Sbjct 2006540 GGGGGCAGGCATCAAAAAACATGCTCATCAACATTTAAAAGTGAAAAAAAAATAAAATTA 2006481
Query 20672 TTAACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTG 20731
||||||||||||||||| || ||||||||| ||||||||||| |||| ||| |||
Sbjct 2006480 ATAACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTG 2006421
Query 20732 AGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCA 20789
| | | | | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||
Sbjct 2006420 AAATCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCA 2006361
Query 20790 GTGCAGGAATCTC-AACTTTCTGCCCTTGTAGTGTAATATACTAT 20833
| || | || || ||||||| |||||||||||| ||||||||||
Sbjct 2006360 GGGCCGAAAATTCAAACTTTCGGCCCTTGTAGTGAAATATACTAT 2006316
Score = 123 bits (136), Expect = 4e-24
Identities = 73/75 (97%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTC-ggggggg 18848
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2006526 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCGGGGGGGG 2006585
Query 18849 CAGGCATCAAATACA 18863
||||||| |||||||
Sbjct 2006586 CAGGCATAAAATACA 2006600
Score = 89.7 bits (98), Expect = 9e-14
Identities = 68/78 (87%), Gaps = 2/78 (3%)
Strand=Plus/Plus
Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATG 18710
||||||||||| |||||||||||| |||||||||| || | || ||||||| ||| |||
Sbjct 2006315 AATAGTATATTTCACTACAAGGGCCGAAAGTTTGAATTTTCGGCCCTGCGCGTCATGATG 2006374
Query 18711 C-CCGAGGCGAAGCCGAG 18727
| ||||||||||||||||
Sbjct 2006375 CGCCGAGGCGAAGCCGAG 2006392
>seq8390
Length=2844
Score = 224 bits (248), Expect = 2e-54
Identities = 218/281 (78%), Gaps = 27/281 (10%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGcccccccGACC-AGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 20638
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2782 TGTATTTTATGCCTGCCCCCCCGACCCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 2723
Query 20639 GGGGGCAGGCATCAATTATTT-----TCAACGC-------------------AATTTTTA 20674
||||||||||||||| | | ||||| |||| ||
Sbjct 2722 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATA 2663
Query 20675 ACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGA 20734
||||||||||||||| || ||||||||| ||||||||||| |||| ||| |||| |
Sbjct 2662 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAA 2603
Query 20735 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTG 20792
| | | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||| |
Sbjct 2602 TCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGG 2543
Query 20793 CAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833
| | || ||||||||| || ||||||||||||| ||||||
Sbjct 2542 CCGAAAATTCAACTTTCGGCTCTTGTAGTGTAATGTACTAT 2502
Score = 212 bits (234), Expect = 1e-50
Identities = 217/284 (76%), Gaps = 27/284 (10%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2782 TGTATTTTATGCCTGCCCCCCCGACCCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 2723
Query 5275 GGGGGCAGGCATCAA-----tttttttCAACGC-------------------AATTTTTA 5310
||||||||||||||| | | ||||| |||| ||
Sbjct 2722 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATA 2663
Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGA 5370
||||||||||||||| || ||||||| | ||||||||||| |||| ||| |||| |
Sbjct 2662 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAA 2603
Query 5371 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGTG 5428
| | | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct 2602 TCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGG 2543
Query 5429 CAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATTT 5472
| | || ||| |||||| || ||||||||||||| ||||||||
Sbjct 2542 CCGAAAATTCA-ACTTTCGGCTCTTGTAGTGTAATGTACTATTT 2500
Score = 123 bits (136), Expect = 4e-24
Identities = 125/166 (75%), Gaps = 25/166 (15%)
Strand=Plus/Plus
Query 18723 CCGAGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTGC---- 18778
||| ||||||||||| | ||||||| || ||||||||||||||||| ||||
Sbjct 2617 CCGCGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTTATTT 2676
Query 18779 ---------------GTTGaaaaaaaT-----TGATGCCTGCCCCCGACATTTGCGGCAC 18818
||||| | || ||||||||||||||||||||||||||||
Sbjct 2677 TTTTTCACTTTAAATGTTGATGAGCATGTTTTTGATGCCTGCCCCCGACATTTGCGGCAC 2736
Query 18819 GAGCGAAGCGAGTGCTGCT-GGTCgggggggCAGGCATCAAATACA 18863
||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct 2737 GAGCGAAGCGAGTGCTGCTGGGTCGGGGGGGCAGGCATAAAATACA 2782
>seq12570
Length=1184
Score = 223 bits (246), Expect = 6e-54
Identities = 216/280 (77%), Gaps = 26/280 (9%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639
||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 TGTATTTTATGTCTGCCCCCCCGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 604
Query 20640 GGGGCAGGCATCAATTATTT-----TCAACGC-------------------AATTTTTAA 20675
||||||||||||| | | ||||| |||| |||
Sbjct 603 AGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATAA 544
Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAG 20735
|||||||||||||| || || |||||| ||||||||||| ||| ||| |||| |
Sbjct 543 CGTACTTTCGACCGGCTATGAAAAAAAATCGTATACACTACGCGGGTCAAAAGTTGAAAT 484
Query 20736 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTGC 20793
| | | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||| ||
Sbjct 483 CTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGGC 424
Query 20794 AGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833
| || ||||||||| |||||||||||||||||||||||
Sbjct 423 CGAAAATTCAACTTTCGGCCCTTGTAGTGTAATATACTAT 384
Score = 206 bits (228), Expect = 4e-49
Identities = 216/283 (76%), Gaps = 28/283 (10%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 663 TGTATTTTATGTCTGCCCCCCC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 605
Query 5275 GGGGGCAGGCATCAA-----tttttttCAACGC-------------------AATTTTTA 5310
| ||||||||||||| | | ||||| |||| ||
Sbjct 604 GAGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATA 545
Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGA 5370
||||||||||||||| || || |||| | ||||||||||| ||| ||| |||| |
Sbjct 544 ACGTACTTTCGACCGGCTATGAAAAAAAATCGTATACACTACGCGGGTCAAAAGTTGAAA 485
Query 5371 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGTG 5428
| | | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct 484 TCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGG 425
Query 5429 CAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471
| | || ||| |||||| ||||||||||||||||||||||||
Sbjct 424 CCGAAAATTCA-ACTTTCGGCCCTTGTAGTGTAATATACTATT 383
Score = 120 bits (132), Expect = 5e-23
Identities = 71/74 (96%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 TTGATGCCTGCCCTCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCGGGGGGGC 649
Query 18850 AGGCATCAAATACA 18863
|| ||| |||||||
Sbjct 650 AGACATAAAATACA 663
Score = 86.0 bits (94), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 3/78 (4%)
Strand=Plus/Plus
Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATG 18710
|||||||||||||||||||||||| ||||| |||| || | || ||||||| ||| |||
Sbjct 383 AATAGTATATTACACTACAAGGGCCGAAAG-TTGAATTTTCGGCCCTGCGCGTCATGATG 441
Query 18711 C-CCGAGGCGAAGCCGAG 18727
| ||||||||||||||||
Sbjct 442 CGCCGAGGCGAAGCCGAG 459
>seq66773
Length=1084
Score = 201 bits (222), Expect = 2e-47
Identities = 197/256 (77%), Gaps = 26/256 (10%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 TGTATTTTATGCCTGCCCCCCCGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 199
Query 20640 GGGGCAGGCATCAATTATTT-----TCAACGC-------------------AATTTTTAA 20675
|||||||||||||| | | ||||| |||| |||
Sbjct 198 GGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATAA 139
Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAG 20735
|||||||||||||| || ||||||||| ||||||||||| |||| ||| |||| |
Sbjct 138 CGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAAT 79
Query 20736 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTGC 20793
| | | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||| ||
Sbjct 78 CTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGAGC 19
Query 20794 AGGAATCTCAACTTTC 20809
| || |||||||||
Sbjct 18 CGAAAATTCAACTTTC 3
Score = 185 bits (204), Expect = 1e-42
Identities = 196/258 (76%), Gaps = 28/258 (11%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 258 TGTATTTTATGCCTGCCCCCCC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 200
Query 5275 GGGGGCAGGCATCA-----AtttttttCAAC-------------------GCAATTTTTA 5310
|||||||||||||| || | ||||| |||| ||
Sbjct 199 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATA 140
Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGA 5370
||||||||||||||| || ||||||| | ||||||||||| |||| ||| |||| |
Sbjct 139 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAA 80
Query 5371 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGTG 5428
| | | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct 79 TCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGAG 20
Query 5429 CAGGAATCTCAGACTTTC 5446
| | || ||| ||||||
Sbjct 19 CCGAAAATTCA-ACTTTC 3
Score = 131 bits (144), Expect = 3e-26
Identities = 125/165 (76%), Gaps = 24/165 (15%)
Strand=Plus/Plus
Query 18723 CCGAGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTGC---- 18778
||| ||||||||||| | ||||||| || ||||||||||||||||| ||||
Sbjct 94 CCGCGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTTATTT 153
Query 18779 ---------------GTTGaaaaaaaT-----TGATGCCTGCCCCCGACATTTGCGGCAC 18818
||||| | || ||||||||||||||||||||||||||||
Sbjct 154 TTTTTCACTTTAAATGTTGATGAGCATGTTTTTGATGCCTGCCCCCGACATTTGCGGCAC 213
Query 18819 GAGCGAAGCGAGTGCTGCTGGTCgggggggCAGGCATCAAATACA 18863
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 214 GAGCGAAGCGAGTGCTGCTGGTCGGGGGGGCAGGCATAAAATACA 258
>seq38601
Length=349
Score = 201 bits (222), Expect = 2e-47
Identities = 197/256 (77%), Gaps = 26/256 (10%)
Strand=Plus/Minus
Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258 TGTATTTTATGCCTGCCCCCCCGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 199
Query 20640 GGGGCAGGCATCAATTATTT-----TCAACGC-------------------AATTTTTAA 20675
|||||||||||||| | | ||||| |||| |||
Sbjct 198 GGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATAA 139
Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAG 20735
|||||||||||||| || ||||||||| ||||||||||| |||| ||| |||| |
Sbjct 138 CGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAAT 79
Query 20736 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTGC 20793
| | | ||||| | ||||||||||||||||||||||||| ||| |||| ||||||| ||
Sbjct 78 CTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGGC 19
Query 20794 AGGAATCTCAACTTTC 20809
| || |||||||||
Sbjct 18 CGAAAATTCAACTTTC 3
Score = 185 bits (204), Expect = 1e-42
Identities = 196/258 (76%), Gaps = 28/258 (11%)
Strand=Plus/Minus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 258 TGTATTTTATGCCTGCCCCCCC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 200
Query 5275 GGGGGCAGGCATCA-----AtttttttCAAC-------------------GCAATTTTTA 5310
|||||||||||||| || | ||||| |||| ||
Sbjct 199 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATA 140
Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGA 5370
||||||||||||||| || ||||||| | ||||||||||| |||| ||| |||| |
Sbjct 139 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACGCGGGCCAAAAGTTGAAA 80
Query 5371 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGTG 5428
| | | ||||| | ||||||||||||||||||||||||| |||| ||| ||||||| |
Sbjct 79 TCTCGGTCCTGCGCGTCATGATGCCCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGG 20
Query 5429 CAGGAATCTCAGACTTTC 5446
| | || ||| ||||||
Sbjct 19 CCGAAAATTCA-ACTTTC 3
Score = 131 bits (144), Expect = 3e-26
Identities = 125/165 (76%), Gaps = 24/165 (15%)
Strand=Plus/Plus
Query 18723 CCGAGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTGC---- 18778
||| ||||||||||| | ||||||| || ||||||||||||||||| ||||
Sbjct 94 CCGCGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTTATTT 153
Query 18779 ---------------GTTGaaaaaaaT-----TGATGCCTGCCCCCGACATTTGCGGCAC 18818
||||| | || ||||||||||||||||||||||||||||
Sbjct 154 TTTTTCACTTTAAATGTTGATGAGCATGTTTTTGATGCCTGCCCCCGACATTTGCGGCAC 213
Query 18819 GAGCGAAGCGAGTGCTGCTGGTCgggggggCAGGCATCAAATACA 18863
||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 214 GAGCGAAGCGAGTGCTGCTGGTCGGGGGGGCAGGCATAAAATACA 258
>seq6539
Length=13747
Score = 161 bits (178), Expect = 2e-35
Identities = 188/258 (73%), Gaps = 47/258 (18%)
Strand=Plus/Minus
Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATG 18710
|||||||||||||||||||||||| ||||||| || || | || ||||||| ||| |||
Sbjct 498 AATAGTATATTACACTACAAGGGCCGAAAGTT-GAATTTTCGGCCCTGCGCGTCATGATG 440
Query 18711 C-CCGAGGCGAAGCCGAG------------TAG--------TGTATACTAGTTTTCTTAC 18749
| |||||||||||||||| ||| | ||||| | |||||||
Sbjct 439 CGCCGAGGCGAAGCCGAGATTTTTCGATTATAGCCGGTTTTTATATACGATTTTTCTTCA 380
Query 18750 TATGCGGTCGAAAGTACGTTAAAAATTGC-------------------GTTGaaaaaaaT 18790
|| ||||||||||||||||| |||| ||||| | ||
Sbjct 379 TAGCCGGTCGAAAGTACGTTATTAATTTTATTTTTTTTCACTTTAAATGTTGATGAGCAT 320
Query 18791 -----TGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggg 18845
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 319 GTTTTTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCGGGG 260
Query 18846 gggCAGGCATCAAATACA 18863
|||||||||| |||||||
Sbjct 259 GGGCAGGCATAAAATACA 242
Score = 145 bits (160), Expect = 1e-30
Identities = 199/280 (71%), Gaps = 50/280 (18%)
Strand=Plus/Plus
Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 TGTATTTTATGCCTGCCCCCCCGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 301
Query 20640 GGGGCAGGCATCAA--------TTAT-----TTT-----------CAACGCAATTTTTAA 20675
|||||||||||||| | || ||| || |||| |||
Sbjct 302 GGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATAA 361
Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAG 20735
|||||||||||||| || ||||||||| ||||| | | | ||| | | | || |
Sbjct 362 CGTACTTTCGACCGGCTATGAAGAAAAATCGTATATA-AAAACCGGC-TATAATCGAAA- 418
Query 20736 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCA-CATGGCGCGCAGTGC 20793
|| |||||||||||||||| ||| |||| ||||||| ||
Sbjct 419 -----AA----------------TCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGGC 457
Query 20794 AGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833
| || ||||||||| |||||||||||||||||||||||
Sbjct 458 CGAAAATTCAACTTTCGGCCCTTGTAGTGTAATATACTAT 497
Score = 129 bits (142), Expect = 1e-25
Identities = 198/283 (70%), Gaps = 52/283 (18%)
Strand=Plus/Plus
Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 242 TGTATTTTATGCCTGCCCCCCC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 300
Query 5275 GGGGGCAGGCATCA-----AtttttttCAAC-------------------GCAATTTTTA 5310
|||||||||||||| || | ||||| |||| ||
Sbjct 301 GGGGGCAGGCATCAAAAACATGCTCATCAACATTTAAAGTGAAAAAAAATAAAATTAATA 360
Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGA 5370
||||||||||||||| || ||||||| | ||||| | | | ||| | | | || |
Sbjct 361 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATATA-AAAACCGGC-TATAATCGAAA 418
Query 5371 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG-GCAT-ATGGCGCGCAGTG 5428
|| |||||||||||||||| |||| ||| ||||||| |
Sbjct 419 ------AA----------------TCTCGGCTTCGCCTCGGCGCATCATGACGCGCAGGG 456
Query 5429 CAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471
| | || ||| |||||| ||||||||||||||||||||||||
Sbjct 457 CCGAAAATTCA-ACTTTCGGCCCTTGTAGTGTAATATACTATT 498
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 83213066120325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |