Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5117 131 2e-25 seq68007 107 2e-18 seq1104 107 2e-18 seq52431 93.3 4e-14 seq5959 89.7 5e-13 >seq5117 Length=2329582 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || |||||||| | || || || || | ||| || ||||| || || ||||| || | Sbjct 1164794 CCGCCGCGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGAC 1164735 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || |||||||| || ||| |||| ||||| |||||||| || ||| Sbjct 1164734 AAGGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGTGGG 1164675 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| | | ||| || | | ||| | ||| |||| | ||||| Sbjct 1164674 ATGCCTTCCTTGTCC-TGAATCTTTGCCTTTACGTTCTCAATAGTGTCGGAAGCCTCGAC 1164616 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || ||||| | || ||||| |||||||||||| Sbjct 1164615 CTCGAGGGTTATGGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCATG 1164567 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||||||| || || || || | |||||| ||||| ||||| || ||||| Sbjct 1167631 CCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCTGAG 1167572 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || ||||| || || |||| || | |||||| ||||||||| Sbjct 1167571 AGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGG 1167512 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||| ||| |||| | | | ||| | || || | | |||| Sbjct 1167511 ATTCCTTCTTTGTC-CTGAATTTTAGCTTTAACATTCTCGATCGTGTCTGATGCTTCGAC 1167453 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||||| || || ||||| || ||||||||||| Sbjct 1167452 TTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGACAAAAATCTGCAT 1167405 Score = 111 bits (122), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTT-TTGAATGTTGTAATCGCT 131066 |||||||| | | || |||||||||| || || ||||| |||||| |||||||| Sbjct 1167175 CCACCGCGAAGTCTCAAAACTAAATGTAACGTAGATTCCTTCTTGAATATTGTAATCAGA 1167116 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||| || || || || || || |||| || | |||||| || ||||| Sbjct 1167115 CAATGTGCGTCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGAGG 1167056 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || |||||||| |||||| ||| | | ||| | || || | | ||||| Sbjct 1167055 AATACCCTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGAC 1166996 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||||| || || |||||||| |||||||||||||| Sbjct 1166995 CTCCAATGTGATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTGCAT 1166948 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | | || || ||||| | || || || |||||||| |||||||| | Sbjct 1167403 CCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGAC 1167344 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || ||||| || || || |||| || | ||| || || ||||| Sbjct 1167343 AATGTGCGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAGGA 1167284 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| ||| | | ||| | || || | | ||||| Sbjct 1167283 ATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACC 1167224 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || |||| |||||| |||||||||||||| Sbjct 1167223 TCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || ||||| || || ||||| | || || || || |||||||||||||| Sbjct 1165250 CCACCACGTAAACGGAGAACCAAATGCAATGTTGATTCTTTCTGAATGTTGTAATCAGAT 1165191 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || ||||| || || ||| |||| || | |||||| || |||||| Sbjct 1165190 AGAGTTCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGG 1165131 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| || || ||| ||| |||| || | ||| | || || | | ||| | Sbjct 1165130 ATTCCTTCCTTATCC-TGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAAC 1165072 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | |||||| || ||||||||||| Sbjct 1165071 TTCCAATGTGATGGTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1165024 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||||||| || || || || | |||||| ||||| ||||| || ||||| Sbjct 1165022 CCACCTCGCAAACGGAGAACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCTGAG 1164963 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||| || || ||||| || || |||| || | || || ||||||||| Sbjct 1164962 AGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGATCCGGAGGG 1164903 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| |||||| |||| | ||| | || || | | || | Sbjct 1164902 ATGCCTTCTTTGTCCTGAATTTTCGCTTTGACGTTCTCGATCGTGTCCGAAGCTTCTACC 1164843 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || | ||||| ||||| |||||||| Sbjct 1164842 TCCAAAGTAATTGTCTTTCCCGTCAAGGTTTTAACGAAGATCTGCAT 1164796 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||| | || || |||||||||||||| ||||| || ||||| ||| || Sbjct 1167841 ACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGACCGTCTTCG 1167782 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 || || || || || |||| || | ||| || || ||||| |||||||| ||||| || Sbjct 1167781 AGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTTGTCC-TG 1167723 Query 131146 ATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 | ||| |||| || | ||| | || || | | ||| | || | || | ||| || Sbjct 1167722 AATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTT 1167663 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || | |||||| || ||||||||||| Sbjct 1167662 TCCCGTCAAAGTTTTGACAAAAATCTGCAT 1167633 >seq68007 Length=840 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || | ||||| || | || || |||||||| |||||||||||| Sbjct 467 CCTCCGCGAAGTCGTAAAACTAAGTGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAA 408 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||| |||||||| || |||||| ||||||||||||| || || || ||| Sbjct 407 AGAGTCCTACCGTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGCTGTTGATCAGGTGGG 348 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || ||||| || | | || | ||||| | | || | Sbjct 347 ATTCCTTCTTTATCTTGTATTTTGGCTTTTACGTTTTCTATGGTATCCGAAGCTTCAACT 288 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||||| ||||| ||||| || || ||||| ||||| Sbjct 287 TCAAGGGTAATTGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGCAT 241 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGA 131078 ||||| || | ||| | || || |||||||||||||| || ||| | || | || | Sbjct 227 CGCAGAACCAGATGAAGTGTTGATTCCTTTTGAATGTTATAGTCGGAAAGAGTTCTGCCA 168 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 ||||| || || ||||| || | || ||||| || || || || || ||||| ||||| Sbjct 167 -TCCTCCAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGGGAATTCCCTCTTT 109 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| |||||| ||| | | || | || || | | || | || | ||| | Sbjct 108 GTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGAT 49 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 ||||||||| || |||||||||||||| ||||||||| || Sbjct 48 GGTTTTACCCGTAAGAGTTTTTACGAAGATCTGCATGCCT 9 >seq1104 Length=1074228 Score = 107 bits (118), Expect = 2e-18 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 131045 CCTTT-TGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAG 131103 ||||| ||||||||||||||| | |||||| ||||| ||||| ||||| ||| || Sbjct 391035 CCTTTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAG 390976 Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || | ||||| || || || |||||||| || ||||| ||| || ||| | | | Sbjct 390975 ATGAGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAACATTC 390916 Query 131164 TCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 || | || |||| || ||| | || | ||||| ||| ||||| || || ||||| || Sbjct 390915 TCGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCACA 390856 Query 131224 AAAATCTGCAT 131234 || |||||||| Sbjct 390855 AAGATCTGCAT 390845 >seq52431 Length=384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||||| || | ||| | || || ||||||||||||||||| ||| Sbjct 304 CCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAA 245 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | ||||| || || || || || | || | ||||||||| || ||||| Sbjct 244 AGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGA 185 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| |||||||| |||||| ||| | | || | || || | | || | Sbjct 184 ATTCCCTCTTTGTCTTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACT 125 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||||||||| || ||||| || ||||| ||||||||| || Sbjct 124 TCAAGGGTGATGGTTTTACCCGTGAGAGTCTTCACGAAGATCTGCATGCCT 74 >seq5959 Length=1871824 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || |||| ||| | || |||||||| || |||||||| ||| Sbjct 1420637 CCTCCTCGAAGACGTAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAG 1420696 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || || ||||| || || |||| | ||| ||||| || |||||| Sbjct 1420697 AGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGG 1420756 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| ||| || |||| | ||| | |||||| | | || | Sbjct 1420757 ATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATAGTATCAGAAGCTTCCACC 1420816 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | || | |||||| || || || ||||| || || || ||||||| Sbjct 1420817 TCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCACAAAGATTTGCATGA 1420865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471602673978240