Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq6737 84.2 5e-13 seq874 80.6 7e-12 >seq6737 Length=3265217 Score = 84.2 bits (92), Expect = 5e-13 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 || || || || ||||||||| | || ||||| || | || | ||| ||||||||| | Sbjct 2452170 TGCACGTTCCATAAATACGGTGCGTCCGGCTCGGTGCAGAAGTTCGACGGACTCTGCGTG 2452111 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTCTACGTG 3486 | ||| || | ||||| |||||||||||| | || ||||||||||||||| | | Sbjct 2452110 TTGCCGCTCAATATCGTCAATGAGAAGATCTACGTGTTTCTCTGGTTCTGGTTCATCATC 2452051 Query 3487 CTAGCCATCATCAGCGGTATC 3507 || | ||| | |||||| || Sbjct 2452050 CTGTCGATCCTGAGCGGTCTC 2452030 >seq874 Length=100981 Score = 80.6 bits (88), Expect = 7e-12 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 3367 TGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATC 3426 ||||| || ||||||| ||| | ||||| || | | |||||||| | ||||| || Sbjct 15876 TGTACCTTCCACAAATTTGGTTCCTCGGGTTCAATCCAGAACTACGATGCGCTCTGTATA 15935 Query 3427 CTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||| || || | |||||||||| |||||||| || ||||||||||||||| Sbjct 15936 CTCGCGTCTAATATCATCAACGAGAAAATCTACATCTTTCTCTGGTTCTGGTTC 15989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12470511748500