Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq15081 104 2e-17 seq56473 98.7 8e-16 seq37753 98.7 8e-16 seq15460 98.7 8e-16 seq15214 98.7 8e-16 seq66093 95.1 1e-14 seq63012 95.1 1e-14 seq5959 91.5 1e-13 seq63547 86.0 5e-12 >seq15081 Length=952 Score = 104 bits (114), Expect = 2e-17 Identities = 87/103 (84%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAG 114386 ||||||||||| |||||||||||||||| ||||||||||||| || ||| |||||| Sbjct 4 TGTCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAAT 63 Query 114387 GAACCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 |||||| ||||||| || ||||||||||| ||| || ||||| Sbjct 64 GAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 106 Score = 104 bits (114), Expect = 2e-17 Identities = 87/103 (84%), Gaps = 4/103 (4%) Strand=Plus/Plus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAG 115583 ||||||||||| |||||||||||||||| ||||||||||||| || ||| |||||| Sbjct 4 TGTCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAAT 63 Query 115584 GAACCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 |||||| ||||||| || ||||||||||| ||| || ||||| Sbjct 64 GAACCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 106 >seq56473 Length=678 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 333 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 392 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 393 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 432 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 333 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 392 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 393 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 432 >seq37753 Length=511 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 34 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 93 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 94 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 133 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 34 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 93 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 94 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 133 >seq15460 Length=661 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 12 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 71 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 72 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 111 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 12 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 71 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 72 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 111 >seq15214 Length=1083 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 392 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 333 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 332 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 293 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/100 (84%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 392 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 333 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 332 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 293 >seq66093 Length=1078 Score = 95.1 bits (104), Expect = 1e-14 Identities = 83/100 (83%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 500 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 441 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| | ||||||||||| ||| || ||||| Sbjct 440 CCATAACTGATTTTATGAGCCATTCGCGGTTTCACCTTAA 401 Score = 95.1 bits (104), Expect = 1e-14 Identities = 83/100 (83%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| ||| Sbjct 500 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGAA 441 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| | ||||||||||| ||| || ||||| Sbjct 440 CCATAACTGATTTTATGAGCCATTCGCGGTTTCACCTTAA 401 >seq63012 Length=1106 Score = 95.1 bits (104), Expect = 1e-14 Identities = 83/100 (83%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| | | Sbjct 613 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGTA 672 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 673 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 712 Score = 95.1 bits (104), Expect = 1e-14 Identities = 83/100 (83%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| ||||||||||||| || ||| |||||| | | Sbjct 613 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAATGTTGGTACAATCTAATGTA 672 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 673 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 712 >seq5959 Length=1871824 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||| || || || || |||||||| || ||||||||| |||||||| || | Sbjct 1420637 CCTCCTCGAAGACGTAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAG 1420696 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||| || ||||| ||||| || |||||||| || Sbjct 1420697 AGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGG 1420756 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCAC---ACTATCAGTAGATTCG 34077 | | |||||||| || || |||| || | || | | |||||| || ||| Sbjct 1420757 ATACCTTCTTTGTCTTGGATCTTA-GCTT--TGACATTCTCTATAGTATCAGAAGCTTCC 1420813 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || | || || |||||||| || || |||||||||||||||||||| Sbjct 1420814 ACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCACAAAGATTTGCAT 1420863 >seq63547 Length=1731 Score = 86.0 bits (94), Expect = 5e-12 Identities = 81/100 (81%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 114389 |||||||| |||||||||||||||| |||| |||||||| | ||| || ||| ||| Sbjct 1211 CATGTATTAGCTCTAGAATTACCACAGTTAACCAAGTAAATTTCGGTACAATTTAATGAA 1270 Query 114390 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 1271 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 1310 Score = 86.0 bits (94), Expect = 5e-12 Identities = 81/100 (81%), Gaps = 4/100 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGA--GTAAGATCTAAGGAA 115586 |||||||| |||||||||||||||| |||| |||||||| | ||| || ||| ||| Sbjct 1211 CATGTATTAGCTCTAGAATTACCACAGTTAACCAAGTAAATTTCGGTACAATTTAATGAA 1270 Query 115587 CCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626 ||| ||||||| || ||||||||||| ||| || ||||| Sbjct 1271 CCATAACTGATTTAATGAGCCATTCGCGGTTTCACCTTAA 1310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396726022507822