Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq68007 159 8e-34 seq5117 132 1e-25 seq52431 131 4e-25 seq5959 123 6e-23 >seq68007 Length=840 Score = 159 bits (176), Expect = 8e-34 Identities = 151/193 (78%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || || |||| || || | |||||||||| ||||| |||||||| Sbjct 432 TTCCTTTTGGATGTTGTAATCGGAAAGAGTCCTACCGTCTTCTAGCTGTTTCCCTGCGAA 373 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | |||||||||| | |||||||||||||||||| || ||||| ||||| ||||| Sbjct 372 GATTAAACGCTGTTGATCAGGTGGGATTCCTTCTTTATCTTGTATTTTGGCTTTTACGTT 313 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 |||||| | ||| | ||| ||||| || || || || || ||||| |||||||| || Sbjct 312 TTCTATGGTATCCGAAGCTTCAACTTCAAGGGTAATTGTTTTGCCGGTGAGAGTCTTCAC 253 Query 288462 GAATATCTGCATT 288474 || || |||||| Sbjct 252 AAAAATTTGCATT 240 Score = 134 bits (148), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||||| || ||| ||||| || |||||||||| Sbjct 240 TCCTCCTCGAAGGCGCAGAACCAGATGAAGTGTTGATTCCTTTTGAATGTTATAGTCGGA 181 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || || || | |||||| || || || |||| ||| |||||| ||||| Sbjct 180 AAGAGTTCTGCCATCCTCCAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGA---TCTGG 124 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | ||||| ||||| ||||||||||| || ||||| |||||||| | || | ||| Sbjct 123 GGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTC 64 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| || || || || ||||| || ||||| |||||||| Sbjct 63 AACTTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTTACGAAGATCTGCAT 13 >seq5117 Length=2329582 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| ||||| | ||| || || | |||| || ||| || |||||||| ||||| | Sbjct 1164795 TCCGCCGCGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGA 1164736 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | |||||||||||||| | || ||||| |||||||||| ||| || || | ||| Sbjct 1164735 CAAGGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGTGG 1164676 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||| || ||||| || || || || ||||| || |||| ||| | || || Sbjct 1164675 GATGCCTTCCTTGTCCTGAATCTTTGCCTTTACGTTCTCAATAGTGTCGGAAGCCTCGAC 1164616 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || || ||||| ||||||| ||||| || || |||||||| Sbjct 1164615 CTCGAGGGTTATGGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCAT 1164568 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| ||||| | || | ||| | ||| ||||||||| ||||| || || | Sbjct 1167403 CCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGAC 1167344 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | |||||||||||||| | |||||||| || ||||||| | ||||||| || Sbjct 1167343 AATGTGCGTCCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAGGA 1167284 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||| || || |||||||| |||||||| || || | || | || || Sbjct 1167283 ATACCTTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACC 1167224 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| || || | ||| |||||||| |||||||| Sbjct 1167223 TCCAATGTGATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177 Score = 129 bits (142), Expect = 1e-24 Identities = 172/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 288235 ATTCATACATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATA 288294 ||| | |||| ||| || | |||| |||||| || |||| || |||||| |||||| Sbjct 1168099 ATTTAGACATTTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGGATA 1168040 Query 288295 TTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGT 288354 || ||||||| | || |||||||| || | ||| || || ||||| ||||| | ||| Sbjct 1168039 TTGTAGTCGGACAAAGTTCGTCCGTCCTCGAGTTGCTTGCCAGCGAAAATCAGTCTTTGT 1167980 Query 288355 TGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG 288414 ||| || || || ||||| || || ||||| ||||| || || || || | || Sbjct 1167979 TGATCGGGAGGAATGCCCTCTTTGTCTTGAATTTTTGCTTTTACATTCTCGATCGTGTCC 1167920 Query 288415 CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || ||||| || ||||| || ||||||||||| ||||||||||| Sbjct 1167919 GAAGCCTCGACCTCCAGTGTGATAGTTTTCCCAGTGAGAGTCTTGACAAATATCTGCAT 1167861 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || |||||||| || | ||| || || |||||||| | ||| ||||| || || Sbjct 1167596 TTCCTTCTGAATATTATAATCTGAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAA 1167537 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| ||| |||||||||||||| ||||| ||||| ||||| || || Sbjct 1167536 GATCAACCTCTGCTGATCCGGAGGGATTCCTTCTTTGTCCTGAATTTTAGCTTTAACATT 1167477 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || | ||| ||||| || |||||||| || || || || || ||||| Sbjct 1167476 CTCGATCGTGTCTGATGCTTCGACTTCCAGAGTGATCGTTTTACCAGTAAGTGTTTTGAC 1167417 Query 288462 GAATATCTGCAT 288473 || |||||||| Sbjct 1167416 AAAAATCTGCAT 1167405 Score = 120 bits (132), Expect = 7e-22 Identities = 164/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGT-GCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||||| ||||| | || | ||| | ||| | || ||| ||| ||||| || || | Sbjct 1167175 CCACCGCGAAGTCTCAAAACTAAATGTAACGTAGATTCCTTCTTGAATATTGTAATCAGA 1167116 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | |||||||||||||| | ||||||||| || ||||||| | ||| ||| || Sbjct 1167115 CAATGTGCGTCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGAGG 1167056 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || ||||| || || |||||||| |||||||| || || | || | || || Sbjct 1167055 AATACCCTCTTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGAC 1166996 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| || || || || ||||| |||||||| |||||||| Sbjct 1166995 CTCCAATGTGATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTGCAT 1166948 Score = 118 bits (130), Expect = 2e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || |||||||| || | ||| || || |||||||| | ||| ||||| || || Sbjct 1164987 TTCCTTCTGAATATTATAATCTGAGAGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAA 1164928 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | |||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct 1164927 GATCAATCTTTGTTGATCCGGAGGGATGCCTTCTTTGTCCTGAATTTTCGCTTTGACGTT 1164868 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || | |||||| || | || || ||||| || |||| || || || Sbjct 1164867 CTCGATCGTGTCCGAAGCTTCTACCTCCAAAGTAATTGTCTTTCCCGTCAAGGTTTTAAC 1164808 Query 288462 GAATATCTGCATT 288474 ||| ||||||||| Sbjct 1164807 GAAGATCTGCATT 1164795 Score = 114 bits (126), Expect = 3e-20 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| || || || || || | || || || || ||||| | |||||||| ||||| Sbjct 1165215 TTCTTTCTGAATGTTGTAATCAGATAGAGTTCGGCCATCTTCGAGCTGTTTTCCGGCGAA 1165156 Query 288342 GATCAGACGCTGTTGAGAATCTGG---GATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||| ||| ||||| ||||||||| |||||||| ||||| ||||| || Sbjct 1165155 GATCAACCTCTGCTGA---TCTGGAGGGATTCCTTCCTTATCCTGAATTTTGGCTTTGAC 1165099 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | || || || ||||| | ||||| ||||| || |||| ||| || Sbjct 1165098 ATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTTCCCGTCAAAGTTTT 1165039 Query 288459 GACGAATATCTGCAT 288473 ||| || |||||||| Sbjct 1165038 GACAAAAATCTGCAT 1165024 >seq52431 Length=384 Score = 131 bits (144), Expect = 4e-25 Identities = 157/212 (74%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| ||| ||| ||||| || || ||||||| || || | || || || Sbjct 286 ACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCA 227 Query 288325 AATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCC 288381 | |||||| || || || ||||||||||| || |||| || ||||| ||||| || Sbjct 226 AGTTGTTTACCAGCAAAAATCAGACGCTGCTG---ATCTGGAGGAATTCCCTCTTTGTCT 170 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || ||||| |||||||| | || | ||| ||||| || ||||| || Sbjct 169 TGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGTT 110 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||| ||||| |||||||| Sbjct 109 TTACCCGTGAGAGTCTTCACGAAGATCTGCAT 78 >seq5959 Length=1871824 Score = 123 bits (136), Expect = 6e-23 Identities = 169/235 (72%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || || | || || ||||||| || || || ||||| || ||||||| Sbjct 1420636 TCCTCCTCGAAGACGTAGAACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGA 1420695 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 ||| || | ||| ||||| | ||| ||||| || ||||||||||| || || |||| Sbjct 1420696 GAGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAAGATCAGACGTTGCTG---ATCTGG 1420752 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| |||||||| || ||||| || ||||| || || ||||||| ||| | ||| Sbjct 1420753 AGGGATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTCTCTATAGTATCAGAAGCTTC 1420812 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || || ||||| || || || || || || || || || || ||||| ||| Sbjct 1420813 CACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCACAAAGATTTGCATGATG 1420867 Score = 107 bits (118), Expect = 5e-18 Identities = 138/189 (73%), Gaps = 6/189 (3%) Strand=Plus/Plus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 || || || ||||||| || || | || || || | |||||| || || || |||||| Sbjct 1420451 TGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGA 1420510 Query 288349 CGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||| || |||| || ||||| ||||| ||||||||||| || ||||| |||||| Sbjct 1420511 CGCTGCTG---ATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCT 1420567 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAAT 288465 || | || | ||| ||||| || || || || || || || |||||||| || || Sbjct 1420568 ATTGTGTCTGAAGCTTCAACTTCAAGAGTAATGGTTTTGCCAGTAAGAGTCTTCACAAAG 1420627 Query 288466 ATCTGCATT 288474 || |||||| Sbjct 1420628 ATTTGCATT 1420636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178603788363458