Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq5711 89.7 4e-13 >seq5711 Length=1389823 Score = 89.7 bits (98), Expect = 4e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 108883 GCTCTCGGCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCC 108942 ||| |||||||||| ||||| ||||| ||||| |||||||| | ||||||||||||||| Sbjct 561708 GCTTTCGGCGAGGGCTGGCATAACTATCACCATGTGTTCCCGTGGGACTACAAGGCCGCC 561649 Query 108943 GAGTTGGGGAAC 108954 |||||||| ||| Sbjct 561648 GAGTTGGGCAAC 561637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381449375326584