Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4102 82.4 9e-11 >seq4102 Length=4342353 Score = 82.4 bits (90), Expect = 9e-11 Identities = 192/290 (66%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376 ||||||||||| ||||| || ||| |||||| || || | |||| | | Sbjct 712760 GGATAAAAATTAACGTCGATGACTTTATCTAGATTACGAGTAACGATTTTTGCCACTGTT 712701 Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATT 116436 | ||| || ||| |||| ||| | || ||| ||||||| || || || ||||| Sbjct 712700 TTAAGTTTATCGAAATCGAAAGTTTTGGTGTCTGTATTGACAAACATATTAACAGCGATA 712641 Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496 ||||| | ||| ||||||| || | | ||| || || | |||||| |||||| Sbjct 712640 GACGCTAAATTGCACACAGCAACTTCCCCAGGACCAGAATATTCAACAATTTCAGTACAC 712581 Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556 | ||| | || || ||||| || | | |||||||| ||| ||||| ||| Sbjct 712580 AGATTGCTGCATTTGATAGTGCCTAAATGTTGGTGATTTGATTTTCGATTACAATGATCT 712521 Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||||| |||||||| || || || || || ||| || ||||||| || Sbjct 712520 TTGTAAAGCATATAAGGTGTTCCAGTTTCTCCTTGAGATCTGAGAATGGC 712471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612974131262760