Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq10522 217 1e-50 seq6737 194 1e-43 seq3291 114 1e-19 seq413 104 2e-16 >seq10522 Length=301676 Score = 217 bits (240), Expect = 1e-50 Identities = 722/1107 (65%), Gaps = 22/1107 (2%) Strand=Plus/Plus Query 517275 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 517334 |||||||||| || | ||||| |||||||| ||||| || |||||||| | || || | Sbjct 198192 TACCATTGGCGTCGATGTCAAAGGTGACTTCGATTTGCGGTACCCCTCTAGGCGCCGGAG 198251 Query 517335 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 517394 | || || || | |||| | || || |||| || || ||||| | || |||| Sbjct 198252 GTATACCCGTCAGCTCAAATTTGCCGAGGATATTGTTGTCCTTAGTCATCGCTCTCTCAC 198311 Query 517395 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 517454 ||||| ||| ||||||| ||| | | |||||| || ||||| || ||||| |||| Sbjct 198312 CCTCGTAAACTTGGATAAGTACTCCCGGTTGATTGTCGGAATATGTAGTAAACG-TCTGA 198370 Query 517455 ATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513 | | || | || || || ||||| || | || | ||||||||| || || || Sbjct 198371 GTCTGTTTCGTTGGGATCGTCGTGTTCCTCTTGATCAAGGTGGTCATAACGCCGCCAGCG 198430 Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573 || || | ||| | || | ||||| ||||| | |||| | || ||||| | Sbjct 198431 GTCTCGATACCCAACGACAACGGAGTCACATCCAGCAGGAGCAAATCTTGAACCG---CC 198487 Query 517574 TCAG-TTTG--ACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630 |||| |||| ||| ||||| || || |||| || || || || |||||||| ||| Sbjct 198488 TCAGATTTGTCACCGTGCAGAATCGCCGCCTGAACTGCCGCGCCGTAGGCAACAGCCTCA 198547 Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCT 517689 || ||||| | || || || | || || || ||||| || | ||||| || || | Sbjct 198548 TCTGGATTGATAGATTTGTTCAATTCCTTGCCGTTGAAGAAGTCTTGAAGTAACTTCTGA 198607 Query 517690 TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATC 517749 | ||| || || | | || || ||||| | ||||| || || || | || || Sbjct 198608 -ATCTTTGGTATCCTGGTGGAGCCACCAACCAGAACAATGCTGTGAACTTGAGCCTTGTC 198666 Query 517750 CAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGA 517809 || |||| || | | || ||||||||||| ||| ||| || ||||| | Sbjct 198667 CATCTTTGCGTCTCTAAGTGCCTTCTCAACGGGTTCGAGAGTGCTTCTGAATAAGTCGGC 198726 Query 517810 ACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGAAC 517867 || ||||| ||||| | || ||||| || || | || || || || || || ||| Sbjct 198727 GCAGAGTTCCTCGAACCTGGCCCTAGT--GATCGATGTGTAGAAGTCGATACCCTCAAAC 198784 Query 517868 AAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCA 517927 || || |||| || || | | || ||||| || | | | || || | || Sbjct 198785 AACGAGTCAATCTCGATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCG 198844 Query 517928 CATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCAAATCTGTTTTATATT 517985 || || ||||| | | | | ||| | || ||| | ||| |||| |||| || | Sbjct 198845 CAGGCGGTCCTCAAGCGCCTCACAGCTCT--CTTGTTGCTGCTCAGATCTTTTTTGTACT 198902 Query 517986 TTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCA 518045 | ||||| || |||| || | |||| | ||||| ||||| || || || || | Sbjct 198903 TCCTCTTAAACTCTTGCACGAAGTGGTTTACCATTCGATTGTCAAAGTCCTCGCCACCGA 198962 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | || | || | ||| | | |||||| ||| | || || |||| | || | | Sbjct 198963 GATGCGTGTCGCCGGCCGTGGATTTTACTTCGAAGATACCGTCCTCAATTGTCAGGATCG 199022 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG- 518164 |||||| ||| ||||| |||| || || || || |||||| |||| | || Sbjct 199023 ACACATCAAAGGTACCACCGCCCAAGTCGAAGATCAGGACATTC--TTCTCACCCGCGGC 199080 Query 518165 -TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223 || ||||||||||| ||||| | ||||| || || || || || || || || | || Sbjct 199081 CTTCTTATCAAGACCGTACGCTATTGCAGCGGCCGTAGGCTCGTTTATTATCCTAAGGAC 199140 Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 ||| || ||||||||| || ||||| || || || || || || || || || ||||| Sbjct 199141 ATTCAGGCCAGCAATTGCGCCGGCATCCTTCGTCGCCTGCCTCTGAGAGTCATTGAAATA 199200 Query 518284 TGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTG 518343 || || || || || || |||| |||| || || | ||||| ||| || | Sbjct 199201 AGCCGGCACGGTGATGACAGCATTTGTTATAGTCTTGCCTAGGTAAGCTTCTGCTGTCTC 199260 Query 518344 TTTCATTTTACTTAAAATCATTGATGA 518370 |||||||| |||| | ||| || || Sbjct 199261 CTTCATTTTCGTTAAGACCATGGAGGA 199287 >seq6737 Length=3265217 Score = 194 bits (214), Expect = 1e-43 Identities = 739/1148 (64%), Gaps = 18/1148 (2%) Strand=Plus/Plus Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273 || ||||| ||||| || || |||| ||||||||||| |||||| || || ||| Sbjct 98283 TTGGTAATGGTAATCTTGTTCTCTTTGCCAGTTGATTTATCCACGGCAGAGACGTTTAGA 98342 Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333 ||||| || || || | ||||| || ||||| || ||||| || || | | || || Sbjct 98343 ATACCGTTTGCGTCGATGTCAAACGTAACTTCGATCTGAGGAACTCCGCGGGGTGCTGGG 98402 Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393 ||||| || | | ||| |||| || ||||||||| ||||| | || ||| Sbjct 98403 GGGATACCGCTAAGCTCGAATTTTCCTAGTAGATTATTATCCTTAGTCATGGCGCGCTCA 98462 Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453 |||||| | | || || || ||| ||||| || | ||| ||||| || |||| Sbjct 98463 CCCTCGTACACCTGAATCAACACGCCAGGCTGATTGTCGGCATAGGTTGTGAAGG-TCTG 98521 Query 517454 GATTTTTTACAA-GGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512 | | | | || || || ||||| || | |||| |||||| | ||| || || Sbjct 98522 AGTCTGCTTCGTCGGGATAGTAGTGTTCCTCTTGATAAGCGCGGTCATGACACCGCCGGC 98581 Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTC 517572 ||| || | ||| ||||| || || ||||| |||| || | | | || | || | Sbjct 98582 TGTCTCGATACCCAGAGAGAGCGGCGTGACGTCAAGCAGAAGCAAGTCCTGCACTT---C 98638 Query 517573 ATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 || | || | || | || |||||||| || | |||||||||||||| ||||| || Sbjct 98639 CTCGGATTTATCACCGTGCAGGATAGCTGCCTGTACGGCAGCACCATATGCCACAGCCTC 98698 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTC 517688 |||||||| | | || || || | || |||||||| || | || | || || | Sbjct 98699 GTCAGGATTGATGGATTTGTTGAGCTCCTTGCCATTGAAGAAGTCCTGCAGGAGCTTCT- 98757 Query 517689 TTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 517748 | ||| ||||| || | || || ||||| || || || || || | || | || | Sbjct 98758 GAATCTTGGGAATTCGCGTAGAACCACCAACCAAGACGATATCGTGAATTTGAGCCTTGT 98817 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 ||| || | || | || || |||||||| ||| | | || | || | Sbjct 98818 CCATCTTGGCGTCGCGCAGCGACTTCTCGACGGGTTCGAGAGTACCACGGAAGAGATCGG 98877 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 517868 || ||||| ||||| ||||| ||||| | | || | || ||||| ||| ||| Sbjct 98878 CGCAGAGTTCCTCGAAACGAGCTCGAGTAATGGAGGTATAGAAGTCGATTCCCTCGTACA 98937 Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 517928 | ||||| | || || | | || || ||||| || || | |||||| || || |||| Sbjct 98938 ATGAATCGATCTCGATACTGGCCTGCGTAGAAGACGACAGAGTACGTTTCGCGCGCTCAC 98997 Query 517929 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGC-TGATTGAT-TCAAATCTGTTTTATATTT 517986 | || || | || | || | ||| || || ||||| |||| || | || || || Sbjct 98998 AGGCCGTGCGCAGACGGCGAAGGGC--GCGCTTGTTTGATGTCAAGTCCTTCTTGTACTT 99055 Query 517987 TCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCCAA 518046 | |||||| || | ||| | | || | || || |||||||||||||| |||| Sbjct 99056 GCGCTTGAACTCCTGTACAAAGTGGTTGACCATGCGGTTGTCAAAATCTTCACCACCCAG 99115 Query 518047 TTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGT 518106 | ||| | || | || | | | || | ||| | |||||||| | | | | | Sbjct 99116 ATGAGTGTCACCCGCTGTGGATTTGACCTCGAAGATGCCATCTTCGATGGTTAGGATGGA 99175 Query 518107 TACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGG-- 518164 || || || |||||||| | |||||| || || || || | || ||| Sbjct 99176 CACGTCGAAAGTGCCACCACCGAGATCAAAGATCAGGACGTT--TCGCTCGCCGGTGGCC 99233 Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || || || ||||||||||||| || || || || || || |||||||| | || || Sbjct 99234 TTCTTGTCGAGACCATACGCAATCGCGGCGGCGGTGGGCTCGTTAATAATACGTAATACG 99293 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || | || | || | || || || || || || || | || || ||||| || || Sbjct 99294 TTCAAGCCCGAGATGGTACCAGCGTCCTTGGTTGCCTGACGCTGCGAGTCGTTGAAGTAA 99353 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344 || || || || || || |||| || || ||| || | ||| || ||| || | Sbjct 99354 GCGGGGACGGTGATCACAGCATTGGTGACAGTTTTGCCTAGATACGCCTCTGCGGTCTCC 99413 Query 518345 TTCATTTT 518352 |||||||| Sbjct 99414 TTCATTTT 99421 >seq3291 Length=4610 Score = 114 bits (126), Expect = 1e-19 Identities = 134/181 (74%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 870800 ATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCA 870859 ||||| |||| |||| ||| |||||||| || ||||||||| | ||||| || ||||| Sbjct 1998 ATTGTGGATTTTTCTAGTCCTAATATTGCCAAGGAAATGCATGTGGGACACTTGAGATCC 1939 Query 870860 ACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGT 870919 || || ||||| || ||||| ||| | |||||| | ||||| ||||| | | Sbjct 1938 ACGATAATTGGAGATAGTATTTCAAGGCTGTTAGAATACTTAGGACATGATGTATTAAGA 1879 Query 870920 ATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTATATTAAAAAT 870979 | |||||||| ||||| ||||| || || || ||||||||||| || || || || || Sbjct 1878 CTCAATCATGTAGGTGACTGGGGTACACAGTTTGGTATGTTAATAGCGCATCTTCAAGAT 1819 Query 870980 A 870980 | Sbjct 1818 A 1818 >seq413 Length=1946445 Score = 104 bits (114), Expect = 2e-16 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 518155 TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 518214 ||| |||| | |||||| | ||||| |||| ||||| || ||||| || ||||| | Sbjct 1145061 TTTATCTTCTTGTTTATCCATGCCATATGCAAGTGCAGCTGCGGTTGGCTCGTTAATTAC 1145002 Query 518215 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 518274 | | ||||| | ||||| ||| || ||||| || || ||||||| ||||||||| Sbjct 1145001 ACGAAGGACATTTAATCCAGCGATTTGCCCAGCATCCTTTGTTGCTTGTCGTTGTGAATC 1144942 Query 518275 GTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 |||||||| || || ||||||||||| |||| Sbjct 1144941 ATTAAAATACGCTGGCACAGTAATAACAGCAT 1144910 Score = 98.7 bits (108), Expect = 8e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 322244 CCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCA 322303 || |||||||| || ||||| ||||| || ||||||| ||| |||| ||| || || Sbjct 1145039 CCATATGCAAGTGCAGCTGCGGTTGGCTCGTTAATTACACGAAGGACATTTAATCCAGCG 1144980 Query 322304 ATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTA 322363 |||| ||| ||| |||||||||| |||| ||||||||||| ||||| |||||| Sbjct 1144979 ATTTGCCCAGCATCCTTTGTTGCTTGTCGTTGTGAATCATTAAAATACGCTGGCACAGTA 1144920 Query 322364 ATAACTGCTTTATTAATAGGTTTTTGTAAATA 322395 ||||| || || || | || | | |||||| Sbjct 1144919 ATAACAGCATTTTTTACAGACGTGTTTAAATA 1144888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3777373035210766