Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq6737 343 2e-89 seq10522 250 3e-61 seq6513 93.3 5e-14 seq4102 87.8 2e-12 seq514 86.0 8e-12 >seq6737 Length=3265217 Score = 343 bits (380), Expect = 2e-89 Identities = 871/1313 (66%), Gaps = 24/1313 (2%) Strand=Plus/Plus Query 6497 TCGACCGTTCCTTTCAT-TTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTT 6555 ||||| || | ||||| |||| | ||||| ||||| |||||||| ||| ||| | | Sbjct 98136 TCGACTGTGCTCTTCATATTGA-AGCAGTAAGACTCGAGGCCATTCTTGGCCGCGATCGT 98194 Query 6556 TTTCGCGTACTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAAT 6615 || | | ||| || || ||| ||||| ||||| || | |||||| ||||||| Sbjct 98195 TTCCTTCTGCTTCTCGTCCTCACTGCGGTACTTCTCCGCTTCGTTCACCATCCTTTCAAT 98254 Query 6616 GTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGA 6675 || || || | || ||||| || || ||||| |||||||| | ||| || | Sbjct 98255 ATCCTCCTTGCTGAGTCGACCCTTGTCGTTGGTAATGGTAATCTTGTTCTCTTTGCCAGT 98314 Query 6676 GGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATT 6735 | ||||| | ||| || || | |||||| ||||| || | || ||| | || | Sbjct 98315 TGATTTATCCACGGCAGAGACGTTTAGAATACCGTTTGCGTCGATGTCAAACGTAACTTC 98374 Query 6736 AATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAA 6795 || || || || | ||||| | || ||||| | | || ||| | || |||| Sbjct 98375 GATCTGAGGAACTCCGCGGGGTGCTGGGGGGATACCGCTAAGCTCGAATTTTCCTAGTAG 98434 Query 6796 ACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTG 6855 | | |||||| | | | | || ||||| || || || | ||| ||| |||| || Sbjct 98435 ATTATTATCCTTAGTCATGGCGCGCTCACCCTCGTACACCTGAATCAACACGCCAGGCTG 98494 Query 6856 ATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGG 6915 ||| || |||| |||| | || | ||| | || || || || || ||| Sbjct 98495 ATTGTCGGCATAGGTTGTGAAGGTCTGAGTCTGCTTCGTCGGGATAGTAGTGTTCCTCTT 98554 Query 6916 AATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTC 6975 |||| || |||||| | ||| || || |||| || ||||| || || || ||||| Sbjct 98555 GATAAGCGCGGTCATGACACCGCCGGCTGTCTCGATACCCAGAGAGAGCGGCGTGACGTC 98614 Query 6976 CAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 | || | || ||| || || ||| ||||| | ||| || || || || Sbjct 98615 AAGCAGAAGCAAGTCCTGCACTTCCTCGGATTTATCACCGTGCAGGATAGCTGCCTGTAC 98674 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | || || ||||| || ||||| || || || || | ||| || || || || || || Sbjct 98675 GGCAGCACCATATGCCACAGCCTCGTCAGGATTGATGGATTTGTTGAGCTCCTTGCCATT 98734 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 || | ||| | | | ||||| || || ||||| || || ||||| ||||| || Sbjct 98735 GAAGAAGTCCTGCAGGAGCTTCTGAATCTTGGGAATTCGCGTAGAACCACCAACCAAGAC 98794 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTC 7215 ||| || | | || | || || ||||| | ||| || || | || ||||| ||||| Sbjct 98795 GATATCGTGAATTTGAGCCTTGTCCATCTTGGCGTCGCGCAGCGACTTCTCGACGGGTTC 98854 Query 7216 CATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGT 7275 | | |||||| | || || |||||||| ||||| || || |||||||| || Sbjct 98855 GAGAGTACCACGGAAGAGATCGGCGCAGAGTTCCTCGAAACGAGCTCGAGTAATGGAGGT 98914 Query 7276 ATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGA 7335 |||||| || | || ||||| || ||||| || || || | | || ||| ||||| Sbjct 98915 ATAGAAGTCGATTCCCTCGTACAATGAATCGATCTCGATACTGGCCTG---CGTAGAAGA 98971 Query 7336 TAAC---GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392 || || || || ||||||||||| ||||| || | ||| |||||||| ||| ||| Sbjct 98972 CGACAGAGTACGTTTCGCGCGCTCACAGGCCGTGCGCAGACGGCGAAGGGCGCGCTTGTT 99031 Query 7393 ACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAG 7449 | | || ||||| | || || || ||||| | |||| || || | | | Sbjct 99032 TGATGTCAAGTCCTTCTTGTACTTGCGCTTGAACTCCTGTACAAAGTGGTTGACCATGCG 99091 Query 7450 TCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAA 7509 | || |||||||||||||||| || || || ||||| || | |||||| || || Sbjct 99092 GTT---GTCAAAATCTTCACCACCCAGATGAGTGTCACCCGCTGTGGATTTGACCTCGAA 99148 Query 7510 GATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT 7569 ||| || |||| ||| ||| | || || || || || |||||||| || ||||| || Sbjct 99149 GATGCCATCTTCGATGGTTAGGATGGACACGTCGAAAGTGCCACCACCGAGATCAAAGAT 99208 Query 7570 GAGTACGTTCGTATCG-TCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCG 7625 || ||||| ||| ||| | || ||||| |||||||| ||||| || || || | Sbjct 99209 CAGGACGTT----TCGCTCGCCGGTGGCCTTCTTGTCGAGACCATACGCAATCGCGGCGG 99264 Query 7626 CCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTC 7684 | || || || ||||||||||| || || ||||| ||| | || || | || || || Sbjct 99265 CGGTGGGCTCGTTAATAATACGTAATAC-GTTCAAGCCCGAGATGGTACCAGCGTCCTTG 99323 Query 7685 GTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACT 7744 || || || || ||||| ||||| ||||| || ||||| || | || || | ||||| Sbjct 99324 GTTGCCTGACGCTGCGAGTCGTTGAAGTAAGCGGGGACGGTGATCACAGCATTGGTGACA 99383 Query 7745 TTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGA 7797 | || || ||||||| || ||| | || |||||||| || |||||||| Sbjct 99384 GTTTTGCCTAGATACGCCTCTGCGGTCTCCTTCATTTTTACTAGGACCATCGA 99436 Score = 100 bits (110), Expect = 4e-16 Identities = 137/191 (72%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 |||| ||||| ||||| |||||||| || ||||| || ||||||||||| ||||| Sbjct 101620 AAAATGGTGTTGTTGGGATTCATGGCGACCTGATTCTTGGCGGCGTCCCCGATGAGACGC 101679 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 || | ||||| || || || || |||||||| || || || |||||||| || Sbjct 101680 TC---GGTCTCCGTGAAGGCCACATAACTGGGGGTCGTGCGGTTACCCTGGTCGTTAGCG 101736 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 || || || || | | | || ||||||| || || ||||| ||||| || | ||| Sbjct 101737 ATGATCTCGACCTTGCCATGCTGGAAGACGCCCACACAGGAATAGGTTGTGCCAAGATCG 101796 Query 8138 ATACCGATTGC 8148 ||||||| ||| Sbjct 101797 ATACCGACTGC 101807 >seq10522 Length=301676 Score = 250 bits (276), Expect = 3e-61 Identities = 731/1113 (66%), Gaps = 16/1113 (1%) Strand=Plus/Plus Query 6705 TACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC--GGTGCGGC 6762 ||||||| || || | || || | || | ||||| ||| ||||||| || || | Sbjct 198192 TACCATTGGCGTCGATGTCAAAGGTGACTTCGATTTGCGGT--ACCCCTCTAGGCGCCGG 198249 Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822 || |||||||| | |||||| | || || | | |||| ||| | | | || | || Sbjct 198250 AGGTATACCCGTCAGCTCAAATTTGCCGAGGATATTGTTGTCCTTAGTCATCGCTCTCTC 198309 Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882 ||| || || |||| || || | |||||||| || || | || | || Sbjct 198310 ACCCTCGTAAACTTGGATAAGTACTCCCGGTTGATTGTCGGAATATGTAGTAAACGTCTG 198369 Query 6883 T-TCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCA 6941 ||| | || | ||| |||||||| || ||| || | | |||||||| || || Sbjct 198370 AGTCTGT-TTCGTTGGGATCGTCGTGTTCCTCTTGATCAAGGTGGTCATAACGCCGCCAG 198428 Query 6942 TAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATT 7001 || |||| || | |||| || ||||| |||| || | || |||||||| | | Sbjct 198429 CGGTCTCGATACCCAACGACAACGGAGTCACATCCAGCAGGAGCAAATCTTGAACCGCCT 198488 Query 7002 CGTTCCCTTCACCCGTTAAGA-TGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCA 7060 | ||||| || ||| | || || || || | ||| ||||| || || |||||| Sbjct 198489 CAGATTTGTCACC-GTGCAGAATCGCCGCCTGAACTGCCGCGCCGTAGGCAACAGCCTCA 198547 Query 7061 TCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC-GA--TAACATTTGT 7117 || || || || | ||| |||| ||| || ||||| || | || || |||| | || Sbjct 198548 TCTGGATTGATAGATTTGTTCAATTCCTTGCCGTTGAAGAAGTCTTGAAGTAACTTCTG- 198606 Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177 ||| || || || | || || ||||| |||| ||| || | |||| | || Sbjct 198607 --AATCTTTGGTATCCTGGTGGAGCCACCAACCAGAACAATGCTGTGAACTTGAGCCTTG 198664 Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCC 7237 || ||||||| ||||| ||||| || || || ||||| | | | | ||| ||||| Sbjct 198665 TCCATCTTTGCGTCTCTAAGTGCCTTCTCAACGGGTTCGAGAGTGCTTCTGAATAAGTCG 198724 Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297 || |||||||| || | || | || || ||||| ||||| || | || || | Sbjct 198725 GCGCAGAGTTCCTCGAACCTGGCCCTAGTGATCGATGTGTAGAAGTCGATACCCTCAAAC 198784 Query 7298 AACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCA 7357 ||||| ||||| || ||| | | || | || ||| ||||||| ||| || | ||| Sbjct 198785 AACGAGTCAATCTCGATGCTCGCCTGCGTCGACGAGCTCAACGTTCTCTTCGCTCTCTCG 198844 Query 7358 CACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTA 7417 || || || | || || | | || | | ||| | | | |||||| || | || Sbjct 198845 CAGGCGGTCCTCAAGCGCCTCACAGCTCTCTTGTTGCTGCTCAGATCTTTTTTGTACTTC 198904 Query 7418 CGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 | |||||||||| |||||| | | || || || || || ||||| | Sbjct 198905 CTCTTAAACTCTTGCACGAAGTGGTTTACCATTCGATTGTCAAAGTCCTCGCCACCGAGA 198964 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || || || || || || | ||| ||||| |||||||| | ||||| | | | ||| Sbjct 198965 TGCGTGTCGCCGGCCGTGGATTTTACTTCGAAGATACCGTCCTCAATTGTCAGGATCGAC 199024 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTC 7597 |||||||| |||||||| |||| ||| || || || || ||| | || | | ||| Sbjct 199025 ACATCAAAGGTACCACCGCCCAAGTCGAAGATCAGGACATTCTTCTCACCCGCGGCCTTC 199084 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA-GACAGTT 7656 ||||| ||||||||||| || || || ||||| || || || || || | || |||| || Sbjct 199085 TTATCAAGACCGTACGCTATTGCAGCGGCCGTAGGCTCGTTTATTATCCTAAGGACA-TT 199143 Query 7657 CAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGC 7716 |||||||||||| | | ||||| |||||||| || | || || || || || || || Sbjct 199144 CAGGCCAGCAATTGCGCCGGCATCCTTCGTCGCCTGCCTCTGAGAGTCATTGAAATAAGC 199203 Query 7717 CGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTT 7776 ||| || || | ||| || | || | |||| || || || | ||| || | || || Sbjct 199204 CGGCACGGTGATGACAGCATTTGTTATAGTCTTGCCTAGGTAAGCTTCTGCTGTCTCCTT 199263 Query 7777 CATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||||| || | ||||| || || | ||| || Sbjct 199264 CATTTTCGTTAAGACCATGGAGGACACCTCCTC 199296 >seq6513 Length=2181386 Score = 93.3 bits (102), Expect = 5e-14 Identities = 85/106 (80%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 22431 AAAAACGTGTAAA-TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAA 22489 ||||| |||||| |||||||| || || || || ||||| ||||| ||||| | ||| Sbjct 2765 AAAAATCTGTAAAGTTTTATCACGCTTCAACGTCCGAGCTTTACGGCAAAGTGATAGAAG 2706 Query 22490 CTCCACAAAATGAAAATACACCGTTTTACCCGCGTTCACCATATGG 22535 |||||||||||||| ||||| |||||||| || || |||||||| Sbjct 2705 TCCCACAAAATGAAAAAACACCATTTTACCCACGCTCTCCATATGG 2660 >seq4102 Length=4342353 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 104668 TTTACGACGACAAATTCACCCGCGAGTGTTCGTCTCAAATAGATATTGGTCGTATACGGT 104727 || |||| |||||| || || | | | || |||| ||||||||| |||| |||||| Sbjct 713367 TTGACGATGACAAACTCTCCAGACAATACGCGCCTCACGTAGATATTGCTCGTGTACGGT 713308 Query 104728 TCGAAACACTCGTTGTTCCCTAAAATCTGGGATGTGGATGCGGTAGGCATAGGTGC 104783 || | | | ||||| |||||||||||||| | ||| || || || ||||||||||| Sbjct 713307 TCAATAGATTCGTTATTCCCTAAAATCTGCGCTGTCGAGGCCGTTGGCATAGGTGC 713252 >seq514 Length=2723796 Score = 86.0 bits (94), Expect = 8e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 11452 CCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCA 11511 |||| |||||||||||||| ||||| | ||||||||| || | ||||||| Sbjct 201385 CCAACTGCATCAATTTCATCAATAAATAATATACACGGTGCATGCTTTCGTGCCATGGAG 201326 Query 11512 AATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCC 11571 || ||||| || ||||| | || || ||||||||||| || | ||| ||| || Sbjct 201325 AACATATCGCGTACTCTAGAAGGACCGACACCTACAAACATCTCTAAGAATTCTGAACCT 201266 Query 11572 GAACACTG-AATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTT 11630 | | |||| ||||||||| || | |||||| ||| |||| ||||| | ||||| Sbjct 201265 G-ATACTGTAATAAAAGGTACATTCGCTTCACCAGCTGTAGCTTTAGCTAACAAAGTTTT 201207 Query 11631 ACCTGTACCTGGTTTACCTGTTAA 11654 ||| || || || |||||| || Sbjct 201206 ACCGGTTCCAGGGGGACCTGTAAA 201183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634580941049240