Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1203 84.2 3e-11 >seq1203 Length=1227042 Score = 84.2 bits (92), Expect = 3e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 153921 GAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACTGCTG 153980 |||||||| ||||||||||||||||| ||||| || |||||||| || || || |||| Sbjct 126995 GAGCAGCACATCAGGAGAGACAAAGCCACCAGCAATATCTGCACCGCACAAGCGTTGCTA 127054 Query 153981 GCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCA 154040 ||||| ||||| | | || || | |||||||| | | ||| ||| ||| ||| Sbjct 127055 GCTAACATGTCCGCGATGTACGCGGTGTATCATGGACCTCAGGGAATACGAAATATCGCA 127114 Query 154041 AGAAGA 154046 || ||| Sbjct 127115 AGCAGA 127120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578709529238240