Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq1203 93.3 5e-14 >seq1203 Length=1227042 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 158596 GAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTG 158655 |||||||| ||||| ||||||||||| ||||| || |||||||| |||||||| |||| Sbjct 126995 GAGCAGCACATCAGGAGAGACAAAGCCACCAGCAATATCTGCACCGCACAAGCGTTGCTA 127054 Query 158656 GCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTACATGCTATAGCA 158715 ||||| ||||| | | | || || | |||||||| | | ||| ||| ||| ||| Sbjct 127055 GCTAACATGTCCGCGATGTACGCGGTGTATCATGGACCTCAGGGAATACGAAATATCGCA 127114 Query 158716 AGAAGA 158721 || ||| Sbjct 127115 AGCAGA 127120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587540249662960