Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5117 168 1e-36 seq52431 163 6e-35 seq68007 161 2e-34 seq5959 154 3e-32 >seq5117 Length=2329582 Score = 168 bits (186), Expect = 1e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||||||||| | || | ||||| |||||||||||||||||||| | | || | Sbjct 1167394 AGTCTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGT 1167335 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||||||||| || || || ||||| | || ||||| || |||||||| |||||| Sbjct 1167334 CCGTCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAGGAATACCTTCT 1167275 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 |||||||||||||| ||| |||||||| || ||||| ||| || || || | || Sbjct 1167274 TTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAATGTG 1167215 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||||||||| |||||||| ||||| | ||||| Sbjct 1167214 ATGGTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCAT 1167177 Score = 156 bits (172), Expect = 9e-33 Identities = 161/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | || || || || |||||||| ||||| | ||||| | || ||||| Sbjct 1165005 AACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCTGAGAGAGTACGGCCGTCTTC 1164946 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || ||||| | || |||||| || ||||| |||||||||||||| || Sbjct 1164945 AAGTTGCTTTCCAGCAAAGATCAATCTTTGTTGATCCGGAGGGATGCCTTCTTTGTCCTG 1164886 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| ||||||||||| || ||||||||| ||| || || | |||| ||||| Sbjct 1164885 AATTTTCGCTTTGACGTTCTCGATCGTGTCCGAAGCTTCTACCTCCAAAGTAATTGTCTT 1164826 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||| ||||| ||||| ||||| | |||||| Sbjct 1164825 TCCCGTCAAGGTTTTAACGAAGATCTGCATT 1164795 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| |||| | ||||||||||| || || ||||| || |||||||| |||| | ||| Sbjct 1168082 TCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGGATATTGTAGTCGGACAAAGT 1168023 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || ||||| ||||| || ||||| || |||| |||||| || ||||||||||| Sbjct 1168022 TCGTCCGTCCTCGAGTTGCTTGCCAGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCC 1167963 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||||||||| || || ||||| || ||||||||| || || || || Sbjct 1167962 CTCTTTGTCTTGAATTTTTGCTTTTACATTCTCGATCGTGTCCGAAGCCTCGACCTCCAG 1167903 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | ||| || || || | ||||| Sbjct 1167902 TGTGATAGTTTTCCCAGTGAGAGTCTTGACAAATATCTGCAT 1167861 Score = 150 bits (166), Expect = 4e-31 Identities = 165/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCC 194983 ||| | ||| | |||||| || || || || || |||||||| || | |||| || | | Sbjct 1164783 TCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGACAAG-GTGCGTC 1164725 Query 194984 CATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTT 195043 | ||||| |||||||| || |||||||| | ||||| ||||| || || |||||||| | Sbjct 1164724 CGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGTGGGATGCCTTCCT 1164665 Query 195044 TGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAA 195103 |||| ||||| ||| ||| ||||||||||| ||||| ||| || || || ||||| | Sbjct 1164664 TGTCCTGAATCTTTGCCTTTACGTTCTCAATAGTGTCGGAAGCCTCGACCTCGAGGGTTA 1164605 Query 195104 CCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||||||| ||||| || ||||| || | ||||| Sbjct 1164604 TGGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCAT 1164568 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || |||||||| | || |||||||| || |||||||| || ||||| | || || | Sbjct 1167850 AGCCTCAAAACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGA 1167791 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || |||||||| || || || || ||||| | || ||||| ||||||||||| ||||| Sbjct 1167790 CCGTCTTCGAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCC 1167731 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| |||||||| ||||| ||||| || ||||| || || ||||| | || Sbjct 1167730 TTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTG 1167671 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| ||||||||||| || || | ||||| Sbjct 1167670 ATGGTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCAT 1167633 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003 || || ||||| ||||| |||||||| | ||||||| |||||||||||||| || || Sbjct 1165220 GTTGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGGCCATCTTCGAGCTGTTTTCCG 1165161 Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063 |||||||| | | || || |||||||| || ||||| || || |||||||| ||| Sbjct 1165160 GCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATCCTGAATTTTGGCTTTG 1165101 Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123 || ||||| || ||||| || || ||||| | || | |||||||| ||||||||| Sbjct 1165100 ACATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTCTTTCCCGTCAAAGTT 1165041 Query 195124 TTTACGAACACTTGCAT 195140 || || || | ||||| Sbjct 1165040 TTGACAAAAATCTGCAT 1165024 Score = 122 bits (134), Expect = 2e-22 Identities = 159/219 (73%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTT-TTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||||||||| | || | || || || || ||||||||||||||| | | || | Sbjct 1167166 AGTCTCAAAACTAAATGTAACGTAGATTCCTTCTTGAATATTGTAATCAGACAATGTGCG 1167107 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 || |||||||| || || || || ||||| | || || || || |||||||| || || Sbjct 1167106 TCCGTCTTCGAGTTGTTTTCCGGCAAAGATCAATCTCTGCTGATCGGGAGGAATACCCTC 1167047 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||||||||||||| ||| |||||||| || ||||| ||| || || || | || Sbjct 1167046 TTTGTCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAATGT 1166987 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | |||||| ||||| | ||||| Sbjct 1166986 GATAGTTTTGCCAGTGAGAGTTTTGACGAAAATCTGCAT 1166948 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | || || || || |||||||| ||||| | ||||| | || ||||| Sbjct 1167614 AACCAAGTGCAAGGTCGATTCCTTCTGAATATTATAATCTGAGAGAGTACGGCCGTCTTC 1167555 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || ||||| | | || || || ||||| || ||||||||||| || Sbjct 1167554 AAGTTGCTTTCCAGCAAAGATCAACCTCTGCTGATCCGGAGGGATTCCTTCTTTGTCCTG 1167495 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| || || ||||| || ||||| || ||| ||||| || || | ||| || Sbjct 1167494 AATTTTAGCTTTAACATTCTCGATCGTGTCTGATGCTTCGACTTCCAGAGTGATCGTTTT 1167435 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| Sbjct 1167434 ACCAGTAAGTGTTTTGACAAAAATCTGCAT 1167405 >seq52431 Length=384 Score = 163 bits (180), Expect = 6e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| || ||||| ||||| || |||||||| ||||| |||| ||||||||| ||||| Sbjct 290 CAAAACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGGAAAGAGTTCTACCATC 231 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || || || ||||| || || || || || || || ||||||||||| || |||||||| Sbjct 230 CTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAGGAATTCCCTCTTTGTC 171 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| ||||| ||| || || || || ||||| ||| ||| ||||||||||| | || Sbjct 170 TTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGT 111 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||| || ||||| | ||||| Sbjct 110 TTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 78 >seq68007 Length=840 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||| ||||| | ||| || || || || ||||| || |||||||||| |||||| || Sbjct 458 AGTCGTAAAACTAAGTGGAGTGTAGATTCCTTTTGGATGTTGTAATCGGAAAGAGTCCTA 399 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||| ||||| || ||||||||||| | || ||||| || || || || |||||| Sbjct 398 CCGTCTTCTAGCTGTTTCCCTGCGAAGATTAAACGCTGTTGATCAGGTGGGATTCCTTCT 339 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || ||||| ||||| || ||||| || ||||| |||||| ||| |||||||||||| Sbjct 338 TTATCTTGTATTTTGGCTTTTACGTTTTCTATGGTATCCGAAGCTTCAACTTCAAGGGTA 279 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | || || || || | ||| || || || | ||||||| Sbjct 278 ATTGTTTTGCCGGTGAGAGTCTTCACAAAAATTTGCATT 240 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| || ||||| || || || |||||||| || || |||| ||||||||| ||||| Sbjct 225 CAGAACCAGATGAAGTGTTGATTCCTTTTGAATGTTATAGTCGGAAAGAGTTCTGCCATC 166 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 || || || || || || || || | |||||||| ||||| ||||| || |||||||| Sbjct 165 CTCCAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGGGAATTCCCTCTTTGTC 106 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 || ||||| ||| || || || || ||||| ||| ||| ||||||||||| | || Sbjct 105 CTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAACTTCAAGGGTGATGGT 46 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | |||||||||||| | ||||| Sbjct 45 TTTACCCGTAAGAGTTTTTACGAAGATCTGCAT 13 >seq5959 Length=1871824 Score = 154 bits (170), Expect = 3e-32 Identities = 160/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| || ||||| || || || ||||| |||| |||||||| |||||||| Sbjct 1420654 AACTAGATGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTTCCATCTTC 1420713 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || ||||| || ||||| || |||||||| || |||||||||||||| Sbjct 1420714 CAGTTGCTTTCCAGCAAAGATCAGACGTTGCTGATCTGGAGGGATACCTTCTTTGTCTTG 1420773 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||| ||||| || || || ||| |||||| ||||| || | || || Sbjct 1420774 GATCTTAGCTTTGACATTCTCTATAGTATCAGAAGCTTCCACCTCAAGAGTGATGGTTTT 1420833 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || | ||||| || || | |||||| Sbjct 1420834 TCCAGTGAGGGTTTTCACAAAGATTTGCAT 1420863 Score = 132 bits (146), Expect = 1e-25 Identities = 141/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 194956 TGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGT 195015 ||||| ||||| |||| ||||||||| ||||| || || || ||||| || || || || Sbjct 1420451 TGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGA 1420510 Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075 || || || ||||||||||| || |||||||| || ||||| ||| || || || || Sbjct 1420511 CGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATT 1420570 Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135 ||||| ||| ||| |||||||| |||| || || || || | ||| || || || | | Sbjct 1420571 GTGTCTGAAGCTTCAACTTCAAGAGTAATGGTTTTGCCAGTAAGAGTCTTCACAAAGATT 1420630 Query 195136 TGCATT 195141 |||||| Sbjct 1420631 TGCATT 1420636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108493484938937