Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08]
69,511 sequences; 396,024,718 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq52431 125 5e-24
seq5117 109 4e-19
seq1104 109 4e-19
seq68007 107 1e-18
seq5959 105 4e-18
>seq52431
Length=384
Score = 125 bits (138), Expect = 5e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
||||||| | | | |||||||| |||| |||| ||| || |||||||| ||||| |
Sbjct 306 TTCCTCCTCGAAGACGCAAAACCAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCGG 247
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| ||| |||| || || ||||| || ||||| || || || ||||| ||| | |
Sbjct 246 AAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAGACGCTGCTGATCTGGAG 187
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | ||||| ||||| || || || || | |||| | || || ||||
Sbjct 186 GAATTCCCTCTTTGTCTTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAA 127
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 126 CTTCAAGGGTGATGGTTTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 78
>seq5117
Length=2329582
Score = 109 bits (120), Expect = 4e-19
Identities = 153/213 (72%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
|||||| || | ||| ||||||||||||||| || || || || |||| |||| ||
Sbjct 1165233 AACCAAATGCAATGTTGATTCTTTCTGAATGTTGTAATCAGATAGAGTTCGGCCATCTTC 1165174
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||||||||||| || || | | ||||| ||| | || | || ||||| ||
Sbjct 1165173 GAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTATCCTG 1165114
Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||| || |||||| || || |||| || |||||||| || | || |||||
Sbjct 1165113 AATTTTGGCTTTGAC--ATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTGATGGTC 1165056
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|||||||| | ||| || ||||| |||||||||
Sbjct 1165055 TTTCCCGTCAAAGTTTTGACAAAAATCTGCATA 1165023
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| || | ||| || | ||||||||||| || ||| ||||| || || ||||| |
Sbjct 1164796 TTCCGCCGCGCAATCTGAGAACCAAGTGAAGGGTTGATTCCTTCTGGATATTGTAGTCAG 1164737
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
| | | | ||| | || || ||||| ||||| || || || | ||||||||||| | |
Sbjct 1164736 ACAAGGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCAGGTG 1164677
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || |||||||| |||||| || ||| | || | || ||||| |
Sbjct 1164676 GGATGCCTTCCTTGTCCTGAATCTTTGCCTTTACGTTCTCAATAGTGTCGGAAGCCTCGA 1164617
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| |||| ||||||||| ||||| || | ||||| ||||| ||||||||
Sbjct 1164616 CCTCGAGGGTTATGGTCTTTCCGGTCAACGTCTTTACAAAAATCTGCAT 1164568
Score = 105 bits (116), Expect = 4e-18
Identities = 156/219 (71%), Gaps = 4/219 (2%)
Strand=Plus/Minus
Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825
|||||||||||| || | ||| ||| || ||||||||||| || || || | || |
Sbjct 1167848 CCTCAAAACCAAATGCAGAGTGGATTCCTTTTGAATGTTATAATCAGACAGTGTGCGACC 1167789
Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885
|| || || |||||||| ||||| || | || || || ||| | || | || |||||
Sbjct 1167788 GTCTTCGAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGATCTGGAGGAATTCCTTCCTT 1167729
Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTT 34943
||| ||| || |||||| || || |||| || |||||||| || | ||
Sbjct 1167728 GTCCTGAATTTTGGCTTTGAC--ATTCTCGATCGTGTCTGACGCCTCAACTTCCAATGTG 1167671
Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||||| |||||||| | ||| || ||||| |||||||||
Sbjct 1167670 ATGGTCTTTCCCGTCAAAGTTTTGACAAAAATCTGCATA 1167632
Score = 86.0 bits (94), Expect = 4e-12
Identities = 161/235 (69%), Gaps = 4/235 (2%)
Strand=Plus/Minus
Query 34750 CATTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGT 34809
||||||| || || | | | || | ||||| ||| ||||||||| || || ||||
Sbjct 1168092 CATTTCCGCCTCTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGGATATTGTAGT 1168033
Query 34810 CCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTT 34869
| || | ||||| | || || || || || || || || || |||| ||| || ||
Sbjct 1168032 CGGACAAAGTTCGTCCGTCCTCGAGTTGCTTGCCAGCGAAAATCAGTCTTTGTTGATCGG 1167973
Query 34870 GCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGC 34927
| || | ||||| ||||| ||| || ||| || || || |||| || ||
Sbjct 1167972 GAGGAATGCCCTCTTTGTCTTGAATTTTTGCTTTTAC--ATTCTCGATCGTGTCCGAAGC 1167915
Query 34928 CTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||| || || | || || ||||| || ||||||||||| ||||| |||||||||
Sbjct 1167914 CTCGACCTCCAGTGTGATAGTTTTCCCAGTGAGAGTCTTGACAAATATCTGCATA 1167860
Score = 84.2 bits (92), Expect = 1e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826
||||||||||| || | |||| |||||| ||||| || || || || | | ||| |
Sbjct 1167391 CTCAAAACCAAATGCAATGTGGATTCTTTTTGAATATTGTAATCAGACAATGTGCGTCCG 1167332
Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886
|| || ||||||||||||||||| || | || || || || | || | || || |||
Sbjct 1167331 TCTTCGAGCTGTTTTCCGGCAAAGATCAATCTCTGTTGATCGGGAGGAATACCTTCTTTG 1167272
Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946
|| ||| ||| || ||| | || | || ||||| || || | || |||
Sbjct 1167271 TCTTGAATTTTCGCCTTCACGTTCTCGATTGTGTCTGAAGCCTCGACCTCCAATGTGATG 1167212
Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| || | ||| || || || |||||||||
Sbjct 1167211 GTCTTTCCTGTTAAAGTTTTGACGAAAATCTGCATA 1167176
>seq1104
Length=1074228
Score = 109 bits (120), Expect = 4e-19
Identities = 141/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851
||||||||||||| || || ||||| | || |||| ||||||||||| || || || |
Sbjct 391034 CTTTCTGAATGTTGTAATCGGAAAGAGTGCGCCCATCCTCCAGCTGTTTGCCAGCGAAGA 390975
Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911
| || || || || ||| | || | ||||||||||| ||||| || || ||
Sbjct 390974 TGAGCCGCTGTTGATCTGGTGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTAAC--ATT 390917
Query 34912 CT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
|| || | || |||||| || || | ||| ||||| || |||||||| || |||||
Sbjct 390916 CTCGATGGTGTCGGAGGCCTCTACCTCAAGGGTAATGGTCTTACCCGTGAGGGTTTTCAC 390857
Query 34970 AAAGATCTGCATA 34982
|||||||||||||
Sbjct 390856 AAAGATCTGCATA 390844
>seq68007
Length=840
Score = 107 bits (118), Expect = 1e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
||||||| | | | || ||||| |||| ||| ||| || |||||||||||||| |
Sbjct 241 TTCCTCCTCGAAGGCGCAGAACCAGATGAAGTGTTGATTCCTTTTGAATGTTATAGTCGG 182
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
|||| ||| |||| ||||| ||||| || ||||| || | ||||| || ||| | |
Sbjct 181 AAAGAGTTCTGCCATCCTCCAGTTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGGG 122
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | ||||| ||||| || || || || | |||| | || || ||||
Sbjct 121 GAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTATTGTGTCTGAAGCTTCAA 62
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| |||||||| ||||| ||||| || || |||||||||||
Sbjct 61 CTTCAAGGGTGATGGTTTTACCCGTAAGAGTTTTTACGAAGATCTGCAT 13
>seq5959
Length=1871824
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| || || ||| | |||| ||||| || ||||| |||||
Sbjct 1420673 TCCTTCTGGATGTTGTAGTCGGAGAGAGTTCTTCCATCTTCCAGTTGCTTTCCAGCAAAG 1420732
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || |||||||| ||| | || | || || ||||| ||||| ||||||
Sbjct 1420733 ATCAGACGTTGCTGATCTGGAGGGATACCTTCTTTGTCTTGGATCTTAGCTTTGACATTC 1420792
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
|||| | ||| || || || || | || ||||||||||| ||||| || ||||||
Sbjct 1420793 TCTATAGTATCAGAAGCTTCCACCTCAAGAGTGATGGTTTTTCCAGTGAGGGTTTTCACA 1420852
Query 34971 AAGATCTGCAT 34981
||||| |||||
Sbjct 1420853 AAGATTTGCAT 1420863
Score = 93.3 bits (102), Expect = 3e-14
Identities = 132/186 (71%), Gaps = 0/186 (0%)
Strand=Plus/Plus
Query 34796 CTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAG 34855
||||||||| ||||| ||||| ||| |||| || || ||||| || ||||| || ||
Sbjct 1420450 CTGAATGTTGTAGTCGGAAAGAGTTCTACCATCCTCAAGTTGTTTACCAGCAAAAATCAG 1420509
Query 34856 TCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTAT 34915
|| ||||| ||| | || | ||||| ||||| || || || || | ||||
Sbjct 1420510 ACGCTGCTGATCTGGAGGAATTCCCTCTTTGTCCTGGATTTTGGCCTTCACATTTTCTAT 1420569
Query 34916 CGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGAT 34975
| || || ||||| || | || |||||||| || || |||||||||||||||||
Sbjct 1420570 TGTGTCTGAAGCTTCAACTTCAAGAGTAATGGTTTTGCCAGTAAGAGTCTTCACAAAGAT 1420629
Query 34976 CTGCAT 34981
|||||
Sbjct 1420630 TTGCAT 1420635
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324358581674808
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