Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq5746 98.7 2e-15 >seq5746 Length=1279033 Score = 98.7 bits (108), Expect = 2e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||||| ||| || || ||||| |||| | |||||| || || |||||||| ||||| Sbjct 288527 CTTGAGCATCTTGACCTTGTCCTCGAGCCTGGAGATGCGCTCGAGCTTGCGCCGTCGGCA 288468 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 |||| || |||| |||||||| | | || | ||| |||||| ||||||| Sbjct 288467 CTTGGACGCGGCCACGCGGTTCCTCTGCCGTTTCCTCTCCAGCTTGATCTTCTCCTGGTT 288408 Query 241609 CTCCATGTCGATCGGAGAC 241627 ||||||||||||||| ||| Sbjct 288407 CTCCATGTCGATCGGCGAC 288389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930723402794240