Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solenopsis_20invicta_20[refseq_20GCF_5F000188075.1_202011-02-08] 69,511 sequences; 396,024,718 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1203 95.1 1e-14 >seq1203 Length=1227042 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | |||||| || ||||| ||||| ||||| ||||| || || || Sbjct 128339 ACTCCAATGGGACCCATGCCAGGCCCGCCACCCCCATGAGGAATGCAGAACGTTTTGTGC 128280 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | || || || || |||| ||| | ||||| || ||| Sbjct 128279 AGATTGAGATGCGACACGTCGCTGCCGTAATCACCGGGTCGACACAAGCCTACTTGAGCA 128220 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || ||||| | |||||||| || ||| | || || || || ||||| Sbjct 128219 TTCATGTTGGCGCCATCCAAGTATACCTGCCCGCCAGCATTGTGCACCATGTTGCATATG 128160 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCAT 138412 | || || || ||| || ||||| | ||||||||||| || ||||| Sbjct 128159 TCGCTAATCGTTTCTTCGAACACACCGTTCGTCGATGGATACGTGATCAT 128110 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 139241 TCTTCTTGCTATAGCATGTAGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACAT 139300 ||| ||||| ||| ||| ||| | | |||||||| | || || | | ||||| Sbjct 127120 TCTGCTTGCGATATTTCGTATTCCCTGAGGTCCATGATACACCGCGTACATCGCGGACAT 127061 Query 139301 ATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATG 139360 || || |||| |||||||| |||||||| || ||||| ||||||||||| || || || Sbjct 127060 GTTAGCTAGCAACGCTTGTGCGGTGCAGATATTGCTGGTGGCTTTGTCTCTCCTGATGTG 127001 Query 139361 CTGCTCTCTAGTTTGTAGTGC 139381 |||||| | ||||| || || Sbjct 127000 CTGCTCGCGCGTTTGGAGAGC 126980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578495315527720